diff --git a/README.md b/README.md index 4566d7e6..c65c8892 100644 --- a/README.md +++ b/README.md @@ -3,13 +3,13 @@ It's built using Langchain and uses a collection of tools to set up and execute ## Environment Setup -To use the OpenMM features in the agent, please set up a conda environment, following these steps. +To use the OpenMM features in the agent, please set up a conda environment following these steps. ``` conda env create -n mdcrow -f environment.yaml conda activate mdcrow ``` -If you already have a conda environment, you can install dependencies before you activate it with the following step. +If you already have a conda environment, you can install dependencies before you activate it with the following steps. - Install the necessary conda dependencies: `conda env update -n -f environment.yaml` @@ -25,14 +25,14 @@ Other tools require API keys, such as paper-qa for literature searches. We recom 1. Copy the `.env.example` file and rename it to `.env`: `cp .env.example .env` 2. Replace the placeholder values in `.env` with your actual keys -You can ask MDCrow to conduct molecular dynamics tasks using OpenAI's GPT model +You can ask MDCrow to conduct molecular dynamics tasks using OpenAI's GPT model. ``` from mdcrow import MDCrow agent = MDCrow(model="gpt-3.5-turbo") agent.run("Simulate protein 1ZNI at 300 K for 0.1 ps and calculate the RMSD over time.") ``` -Note: to distinguish Together models from the rest, you'll need to add "together\" prefix in model flag, such as `agent = MDCrow(model="together/meta-llama/Meta-Llama-3.1-70B-Instruct-Turbo")` +Note: To distinguish Together models from the rest, you'll need to add the "together\" prefix in the model flag, such as `agent = MDCrow(model="together/meta-llama/Meta-Llama-3.1-70B-Instruct-Turbo")` ## LLM Providers By default, we support LLMs through OpenAI API. However, feel free to use other LLM providers. Make sure to install the necessary package for it. Here's a list of packages required for alternative LLM providers we support: