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Mark spliced/unspliced reads on original BAM file #394

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taffy-miao opened this issue Jun 5, 2024 · 0 comments
Open

Mark spliced/unspliced reads on original BAM file #394

taffy-miao opened this issue Jun 5, 2024 · 0 comments

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@taffy-miao
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Hi Team,
Thanks for the package.
I wonder can velocyto mark spliced/unspliced reads on the original BAM file or the sorted file? If not, I want to use pysam to add customed tag to identify spliced/unspliced/ambiguous reads in the counting process, which file and where should I edit?
Thanks for your help

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