-
Notifications
You must be signed in to change notification settings - Fork 0
/
Copy pathSCORE_gui.m
394 lines (388 loc) · 14.1 KB
/
SCORE_gui.m
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
function [ ] = SCORE_gui( new_load )
%GUI to score the EEG data for high frequency oscillations (HFO's)
%
% INPUT:
%
% data - an array with dimensions [#Samples , #Channels]
%
% OUTPUT:
%
%
%
%%%%%%%%%
%delete previous figure
delete(findobj('Tag','SCORE_GUI'));
% Initialize the figure
figure('Position',[1180 100 330 480],'Tag','SCORE_GUI');hold on;
set(findobj('Tag','SCORE_GUI'),'KeyPressFcn',@keypressCallback);
set(gca,'Visible','off')
set(findobj('Tag','SCORE_GUI'),'toolbar','figure') %enable the toolbar for the figure
%create the structure that will hold the gui information
scores=guidata(findobj('Tag','SCORE_GUI'));
if new_load==0; %new scoring file
scores.hfos=cell(0,3);
scores.fname='....file-path...';
elseif new_load==1;
[fname pth] = uigetfile('*.txt','Choose .txt File');
waiting=1;
while waiting; pause(1); waiting=~exist('fname','var');end
dataFile = fullfile(pth,fname);if pth==0;return;end
scores.hfos = read_score(dataFile); %import the scored file
scores.fname=dataFile;
end
%set default data params
scores.dex=[]; %hfo index
scores.onoff=0; %onset or offset
scores.tag=''; % tag of the event
scores.lines=0; %don't plot the lines
%%%%%%%%%
% TABLE %
%%%%%%%%%
tableH=uitable(findobj('Tag','SCORE_GUI'),'Tag','score_table','Data', scores.hfos, ...
'RowName', '', ...
'ColumnName', {'ONSET', 'OFFSET','TAG'}, ...
'ColumnEditable',logical([0 0 1]),...
'ColumnWidth', {90,90,90},...
'Enable','on');
set(tableH,'CellEditCallback',@celleditCallback);
%set(tableH,'ButtonDownFcn',@tableCallback);
set(tableH,'CellSelectionCallback',@selectCallback);
set(tableH,'KeyPressFcn',@keypressCallback);
guidata(findobj('Tag','SCORE_GUI'),scores);
% function [hfotab]=tableCallback(tableH,eventData)
% disp('push')
% end
function [scores]=selectCallback(tableH,eventData)
scores=guidata(findobj('Tag','SCORE_GUI'));
scores.dex=eventData.Indices;
guidata(findobj('Tag','SCORE_GUI'),scores); %update guidata with dex
% First check if the cell is empty
if isempty(scores.dex)|...
isempty(scores.hfos{scores.dex(1),scores.dex(2)})|...
scores.dex(2)==3;
return;
end
%return if empty, or 3rd column (tag)
%if scores.dex(2)<3 %only the onset/offset fields make plot jump
%plot
handles=guidata(findobj('Tag','HFO_GUI'));
handles.samp=scores.hfos{scores.dex(1),scores.dex(2)};
handles.xval=(handles.samp-handles.window_samples/2)/handles.num_samples;
set(findobj('Tag','scrollbarX'),'Value',handles.xval);
guidata(findobj('Tag','HFO_GUI'),handles)
figure(findobj('Tag','HFO_GUI'));
handles=plot_data(handles);
guidata(findobj('Tag','HFO_GUI'),handles)
figure(findobj('Tag','SCORE_GUI'));
%end
set(findobj('Tag','editRow'),'String',num2str(scores.dex(1)));
guidata(findobj('Tag','SCORE_GUI'),scores);
end
function [scores]=celleditCallback(tableH,eventData)
scores=guidata(findobj('Tag','SCORE_GUI'));
if eventData.Indices(2)==3
scores.hfos{eventData.Indices(1),3}=eventData.EditData;
set(findobj('Tag','score_table'),'Data',scores.hfos);
%unselect
scores.dex=[];
set(findobj('Tag','editRow'),'String','');
%save scores structure
guidata(findobj('Tag','SCORE_GUI'),scores);
end
end
function [scores]=keypressCallback(tableH,eventData)
%important note about keypress
%keyboard;
scores=guidata(findobj('Tag','SCORE_GUI'));
if isempty(scores.dex);return;end
switch eventData.Key
case {'return','space'}
%if strcmp(eventData.Key,'return');scores.dex(1)=scores.dex(1)-1;end %return causes select to jump
if scores.dex(2)<3 & ~isempty(scores.tag)
scores.hfos{scores.dex(1),3}=scores.tag;
end
guidata(findobj('Tag','SCORE_GUI'),scores)
set(findobj('Tag','score_table'),'Data',scores.hfos);
eventData.Indices=[scores.dex(1)+1 scores.dex(2)];
if eventData.Indices(1)>size(scores.hfos,1);eventData.Indices(1)=size(scores.hfos,1);end
[scores]=selectCallback(tableH,eventData);
case {'backspace','delete'}
%delete the point
%y = x(~ismember(1:size(x,1), [3,9]), :);
scores.hfos=scores.hfos(~ismember(1:size(scores.hfos,1),[scores.dex(1)]),:);
guidata(findobj('Tag','SCORE_GUI'),scores)
scores=pushSORT(tableH,eventData);
scores.dex=[];
set(findobj('Tag','editRow'),'String','');
guidata(findobj('Tag','SCORE_GUI'),scores)
return
case '1'
%mixed HFO
if ~isempty(scores.dex)&scores.dex(2)~=3
scores.hfos{scores.dex(1),3}='1'; %store in third column as ripple
% if ~isempty(scores.tag)
% scores.hfos{scores.dex(1),3}=scores.tag;
% end
end
case '2'
%Artifact
if ~isempty(scores.dex)&scores.dex(2)~=3
scores.hfos{scores.dex(1),3}='2'; %store in third column as Artifact
% if ~isempty(scores.tag)
% scores.hfos{scores.dex(1),3}=scores.tag;
% end
end
case '3'
%Fast-Ripple
if ~isempty(scores.dex)&scores.dex(2)~=3
scores.hfos{scores.dex(1),3}='3'; %store in third column as Fast-ripple
% if ~isempty(scores.tag)
% scores.hfos{scores.dex(1),3}=scores.tag;
% end
end
case '4'
%slow ripple
if ~isempty(scores.dex)&scores.dex(2)~=3
scores.hfos{scores.dex(1),3}='4'; %store in third column as slow ripple
% if ~isempty(scores.tag)
% scores.hfos{scores.dex(1),3}=scores.tag;
% end
end
end
guidata(findobj('Tag','SCORE_GUI'),scores)
set(findobj('Tag','editRow'),'String',num2str(scores.dex(1)));
set(findobj('Tag','score_table'),'Data',scores.hfos);
end
%%%%%%%%%%%%%%
% BUTTONS
%%%%%%%%%%%%%%%
%
hImport = uicontrol(findobj('Tag','SCORE_GUI'),'Style','pushbutton',...
'string','SAVE','Position',[10 420 50 30],'Callback',@saveScore);
function saveScore(hImport,eventdata)
scores=guidata(findobj('Tag','SCORE_GUI'));
write_score(scores.fname,scores.hfos);
end
%field for choosing window size
uicontrol(findobj('Tag','SCORE_GUI'),'Style','edit',...
'String',scores.fname,'FontWeight','bold',...
'Position',[10 450 310 25],...
'Tag',['editFname'],...
'Callback',{@editFname},...
'Visible','on')
function editFname(hObj,eventdata)
scores=guidata(findobj('Tag','SCORE_GUI'));
scores.fname=get(hObj,'String');
guidata(findobj('Tag','SCORE_GUI'),scores);
end
%NOISE CHECKBOX
uicontrol(findobj('Tag','SCORE_GUI'),'Style','checkbox',...
'String','noise','FontWeight','bold',...
'Position',[210 330 65 20],...
'Tag',['checkNoise'],...
'Callback',{@checkNoise},...
'Visible','on')
%set(findobj('Tag','checkNoise'),'KeyPressFcn',@keypressCallback);
function scores=checkNoise(hObj,eventdata)
scores=guidata(findobj('Tag','SCORE_GUI'));
if get(hObj,'Value')
scores.tag='noise';
set(findobj('Tag','checkHFO'),'Value',0)
elseif ~get(hObj,'Value')
scores.tag='';
end
guidata(findobj('Tag','SCORE_GUI'),scores);
end
%HFO CHECKBOX
uicontrol(findobj('Tag','SCORE_GUI'),'Style','checkbox',...
'String','HFO','FontWeight','bold',...
'Position',[210 360 50 20],...
'Tag',['checkHFO'],...
'Callback',{@checkHFO},...
'Visible','on')
%set(findobj('Tag','checkHFO'),'KeyPressFcn',@keypressCallback);
function [scores]=checkHFO(hObj,eventdata)
scores=guidata(findobj('Tag','SCORE_GUI'));
if get(hObj,'Value')
scores.tag='hfo';
set(findobj('Tag','checkNoise'),'Value',0)
elseif ~get(hObj,'Value')
scores.tag='';
end
guidata(findobj('Tag','SCORE_GUI'),scores);
end
%ROW FIELD
uicontrol(findobj('Tag','SCORE_GUI'),'Style','edit',...
'String','','FontWeight','bold',...
'Position',[10 330 80 20],...
'Tag',['editRow'],...
'Callback',{},...
'Visible','on')
%UNSELECT Button
uicontrol(findobj('Tag','SCORE_GUI'),'Style','pushbutton',...
'String','UNSELECT','FontWeight','bold',...
'Position',[10 360 80 20],...
'Tag',['pushUNSELECT'],...
'Callback',{@pushUNSELECT},...
'Visible','on')
%set(findobj('Tag','checkHFO'),'KeyPressFcn',@keypressCallback);
function [scores]=pushUNSELECT(hObj,eventdata)
scores=guidata(findobj('Tag','SCORE_GUI'));
scores.dex=[];
set(findobj('Tag','editRow'),'String','');
%you can now add more events because the keypress fun in the HFO_gui will
%auto add for empty dexes
guidata(findobj('Tag','SCORE_GUI'),scores);
end
%SORT Button
uicontrol(findobj('Tag','SCORE_GUI'),'Style','pushbutton',...
'String','SORT','FontWeight','bold',...
'Position',[100 360 40 20],...
'Tag',['pushSORT'],...
'Callback',{@pushSORT},...
'Visible','on')
%set(findobj('Tag','checkHFO'),'KeyPressFcn',@keypressCallback);
function [scores]=pushSORT(hObj,eventdata)
scores=guidata(findobj('Tag','SCORE_GUI'));
[~,i]=sort([scores.hfos{:,1}]);
scores.hfos=scores.hfos(i,:);
set(findobj('Tag','score_table'),'Data',scores.hfos);
%you can now add more events because the keypress fun in the HFO_gui will
%auto add for empty dexes
guidata(findobj('Tag','SCORE_GUI'),scores);
end
%LINES BOX
uicontrol(findobj('Tag','SCORE_GUI'),'Style','checkbox',...
'String','PLOT','FontWeight','bold',...
'Position',[100 330 70 20],...
'Tag',['checkPLOT'],...
'Callback',{@checkPLOT},...
'Visible','on','Value',scores.lines)
%set(findobj('Tag','checkHFO'),'KeyPressFcn',@keypressCallback);
function [scores]=checkPLOT(hObj,eventdata)
scores=guidata(findobj('Tag','SCORE_GUI'));
scores.lines=get(hObj,'Value');
if ~scores.lines
try
delete(findall(findobj('Tag','HFO_GUI'),'Tag','scoreline'));
end
end
%you can now add more events because the keypress fun in the HFO_gui will
%auto add for empty dexes
guidata(findobj('Tag','SCORE_GUI'),scores);
end
%NEW CHECKBOX
% uicontrol(findobj('Tag','SCORE_GUI'),'Style','checkbox',...
% 'String','NEW','FontWeight','bold',...
% 'Position',[10 360 50 20],...
% 'Tag',['checkNEW'],...
% 'Callback',{@checkNEW},...
% 'Visible','on')
% function [scores]=checkNEW(hObj,eventdata)
% scores=guidata(findobj('Tag','SCORE_GUI'));
% if get(hObj,'Value')
% scores.tag='hfo';
% set(findobj('Tag','checkNoise'),'Value',0)
% elseif ~get(hObj,'Value')
% scores.tag='';
% end
% guidata(findobj('Tag','SCORE_GUI'),scores);
% end
% %STOPBUTTON
% uicontrol(findobj('Tag','HFO_GUI'),'Style','radiobutton',...
% 'String','STOP','FontWeight','bold',...
% 'Position',[1000 55 75 20],...
% 'Tag',['pushStop'],...
% 'Callback',{@pushStop},...
% 'Visible','on','Value',1)
% function pushStop(hObj,eventdata)
% handles=guidata(findobj('Tag','HFO_GUI'));
% handles.play=0;set(findobj('Tag','pushPlay'),'Value',0);
% set(findobj('Tag','pushStop'),'Value',1)
% guidata(findobj('Tag','HFO_GUI'),handles)
% end
% %SCOREBUTTON
% uicontrol(findobj('Tag','HFO_GUI'),'Style','radiobutton',...
% 'String','SCORE','FontWeight','bold',...
% 'Position',[1000 450 75 20],...
% 'Tag',['pushScore'],...
% 'Callback',{@pushScore},...
% 'Visible','on','Value',0)
% function pushScore(hObj,eventdata)
% handles=guidata(findobj('Tag','HFO_GUI'));
% handles.score=1;set(findobj('Tag','pushScore'),'Value',1);
% guidata(findobj('Tag','HFO_GUI'),handles)
%
% end
%
% % Scroll buttons
% % X-Axis SLIDER
% uicontrol(findobj('Tag','HFO_GUI'),'Style','slider',...
% 'Min',0,'Max',1,'Value',handles.xval,...
% 'SliderStep',handles.slider_step,...
% 'Position',[100 5 880 20],...
% 'Tag',['scrollbarX'],...
% 'Callback',@scrollBarX,...
% 'Visible','on', 'BusyAction','cancel')
%
% function scrollBarX(hObj, eventdata)
% handles=guidata(findobj('Tag','HFO_GUI'));
% handles.xval = get(hObj,'Value');
% guidata(findobj('Tag','HFO_GUI'),handles)
% figure(findobj('Tag','HFO_GUI'));hold on;
% plot_data();
% guidata(findobj('Tag','HFO_GUI'),handles)
% end %scrollbar function
% % FOR scroll wheel
% function scrollWheel(hObj, eventdata)
% handles=guidata(findobj('Tag','HFO_GUI'));
% handles.xval = get(findobj('Tag','scrollbarX'),'Value');
% %make sure it doesnt go below zero or above one
% if handles.xval<0 | handles.xval>1;return;end
% figure(findobj('Tag','HFO_GUI'));hold on;
% guidata(findobj('Tag','HFO_GUI'),handles)
% plot_data();
% set(findobj('Tag','scrollbarX'),'Value',handles.xval); %update the slider
% guidata(findobj('Tag','HFO_GUI'),handles)
% end %scrollbar function
%
% % Y-Axis SLIDER
% uicontrol(findobj('Tag','HFO_GUI'),'Style','slider',...
% 'Min',0.01,'Max',40,'Value',handles.yval1,...
% 'SliderStep',[.01 .1],...
% 'Position',[20 200 20 100],...
% 'Tag',['scrollbarY1'],...
% 'Callback',@scrollBarY1,...
% 'Visible','on', 'BusyAction','cancel')
% function scrollBarY1(hObj, eventdata)
% handles=guidata(findobj('Tag','HFO_GUI'));
% handles.yval1 = get(hObj,'Value');
% guidata(findobj('Tag','HFO_GUI'),handles)
% figure(findobj('Tag','HFO_GUI'))
% plot_data();
%
% end %scrollbar function
% %Jump-To pushbutton
% uicontrol(findobj('Tag','HFO_GUI'),'Style','pushbutton',...
% 'String',['Jump-To '],...
% 'Position',[12 20 60 30],...
% 'Tag',['checkboxcursor'],...
% 'Callback',{@pushGOTO},...
% 'Visible','on')
% % --- Executes on button press in pushGOTO.
% function [handles]=pushGOTO(hObj, eventdata)
% handles=guidata(findobj('Tag','HFO_GUI'));
% handles.samp=str2double(get(findobj('Tag','editXpoint'),'String'));
% handles.xval=(handles.samp-1)/handles.num_samples;
% set(findobj('Tag','scrollbarX'),'Value',handles.xval);
% guidata(findobj('Tag','HFO_GUI'),handles)
% plot_data()
% end %noise checkbox function
%
%
%
% guidata(findobj('Tag','HFO_GUI'),handles)
%
%
end
%