DESCRIPTION

Package: SINBAD
Type: Package
Title: A Single Cell DNA Methylation Data Processing Pipeline
Version: 0.1.2
Author: Yasin Uzun
Maintainer: The package maintainer <yasin.delco@gmail.com>
Description: Performs demultiplexing, adapter trimming, mapping, quantification, dimensionality reduction and differential methylation analysis for single cell DNA methylation data.
License: MIT License
Encoding: UTF-8
LazyData: true
biocViews:
Imports:
  data.table,
  DelayedArray,
  ShortRead,
  readr,
  doSNOW,
  reshape2,
  Rsamtools,
  densityClust,
  umap,
  colorspace,
  RColorBrewer,
  scales,
  ggplot2,
  viridis,
  dplyr,
  GenomicRanges,
  parallel