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test_memory.py
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from __future__ import annotations
import re
from typing import TYPE_CHECKING
import numpy as np
import pytest
import zarr
from zarr.core.buffer import Buffer, cpu, gpu
from zarr.storage import GpuMemoryStore, MemoryStore
from zarr.testing.store import StoreTests
from zarr.testing.utils import gpu_test
if TYPE_CHECKING:
from zarr.core.common import ZarrFormat
# TODO: work out where this warning is coming from and fix it
@pytest.mark.filterwarnings(
re.escape("ignore:coroutine 'ClientCreatorContext.__aexit__' was never awaited")
)
class TestMemoryStore(StoreTests[MemoryStore, cpu.Buffer]):
store_cls = MemoryStore
buffer_cls = cpu.Buffer
async def set(self, store: MemoryStore, key: str, value: Buffer) -> None:
store._store_dict[key] = value
async def get(self, store: MemoryStore, key: str) -> Buffer:
return store._store_dict[key]
@pytest.fixture(params=[None, True])
def store_kwargs(
self, request: pytest.FixtureRequest
) -> dict[str, str | dict[str, Buffer] | None]:
kwargs = {"store_dict": None}
if request.param is True:
kwargs["store_dict"] = {}
return kwargs
@pytest.fixture
def store(self, store_kwargs: str | dict[str, Buffer] | None) -> MemoryStore:
return self.store_cls(**store_kwargs)
def test_store_repr(self, store: MemoryStore) -> None:
assert str(store) == f"memory://{id(store._store_dict)}"
def test_store_supports_writes(self, store: MemoryStore) -> None:
assert store.supports_writes
def test_store_supports_listing(self, store: MemoryStore) -> None:
assert store.supports_listing
def test_store_supports_partial_writes(self, store: MemoryStore) -> None:
assert store.supports_partial_writes
def test_list_prefix(self, store: MemoryStore) -> None:
assert True
@pytest.mark.parametrize("dtype", ["uint8", "float32", "int64"])
@pytest.mark.parametrize("zarr_format", [2, 3])
async def test_deterministic_size(
self, store: MemoryStore, dtype, zarr_format: ZarrFormat
) -> None:
a = zarr.empty(
store=store,
shape=(3,),
chunks=(1000,),
dtype=dtype,
zarr_format=zarr_format,
overwrite=True,
)
a[...] = 1
a.resize((1000,))
np.testing.assert_array_equal(a[:3], 1)
np.testing.assert_array_equal(a[3:], 0)
# TODO: fix this warning
@pytest.mark.filterwarnings("ignore:Unclosed client session:ResourceWarning")
@gpu_test
class TestGpuMemoryStore(StoreTests[GpuMemoryStore, gpu.Buffer]):
store_cls = GpuMemoryStore
buffer_cls = gpu.Buffer
async def set(self, store: GpuMemoryStore, key: str, value: Buffer) -> None:
store._store_dict[key] = value
async def get(self, store: MemoryStore, key: str) -> Buffer:
return store._store_dict[key]
@pytest.fixture(params=[None, True])
def store_kwargs(
self, request: pytest.FixtureRequest
) -> dict[str, str | dict[str, Buffer] | None]:
kwargs = {"store_dict": None}
if request.param is True:
kwargs["store_dict"] = {}
return kwargs
@pytest.fixture
def store(self, store_kwargs: str | dict[str, gpu.Buffer] | None) -> GpuMemoryStore:
return self.store_cls(**store_kwargs)
def test_store_repr(self, store: GpuMemoryStore) -> None:
assert str(store) == f"gpumemory://{id(store._store_dict)}"
def test_store_supports_writes(self, store: GpuMemoryStore) -> None:
assert store.supports_writes
def test_store_supports_listing(self, store: GpuMemoryStore) -> None:
assert store.supports_listing
def test_store_supports_partial_writes(self, store: GpuMemoryStore) -> None:
assert store.supports_partial_writes
def test_list_prefix(self, store: GpuMemoryStore) -> None:
assert True
def test_dict_reference(self, store: GpuMemoryStore) -> None:
store_dict = {}
result = GpuMemoryStore(store_dict=store_dict)
assert result._store_dict is store_dict
def test_from_dict(self):
d = {
"a": gpu.Buffer.from_bytes(b"aaaa"),
"b": cpu.Buffer.from_bytes(b"bbbb"),
}
result = GpuMemoryStore.from_dict(d)
for v in result._store_dict.values():
assert type(v) is gpu.Buffer