This repository aims to gather different databases used as reference for the genome-scale metabolic model reconstruction software tools presented in the paper: C. Tarzi, G. Zampieri, N. Sullivan, C. Angione, "Tools for investigating microbial communities by genome-scale metabolic model reconstruction and analysis: a survey and practical guidelines to their use"
This table contains some key information related to different databases:
-DB name: database name
-Scope: contains a brief description of the reference database
-Available search: consists of highliting all the possible ways to search for targeted information (e.g, pathways, reactions, etc.)
-Applications: represents all the applications of the database
-DB information: database information
-Guide: user guide
-Accessibility: how to access the database
-URL: the database website