steinbock

A toolkit for processing multiplexed tissue images

Documentation is available at https://bodenmillergroup.github.io/steinbock

Citation

Please cite the following paper when using steinbock in your work:

Windhager, J., Zanotelli, V.R.T., Schulz, D. et al. An end-to-end workflow for multiplexed image processing and analysis. Nat Protoc (2023). https://doi.org/10.1038/s41596-023-00881-0

@article{Windhager2023,
    author = {Windhager, Jonas and Zanotelli, Vito R.T. and Schulz, Daniel and Meyer, Lasse and Daniel, Michelle and Bodenmiller, Bernd and Eling, Nils},
    title = {An end-to-end workflow for multiplexed image processing and analysis},
    year = {2023},
    doi = {10.1038/s41596-023-00881-0},
    URL = {https://www.nature.com/articles/s41596-023-00881-0},
    journal = {Nature Protocols}
}