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SarahOuologuem committed Feb 12, 2025
1 parent b6844b5 commit bbf99cc
Showing 1 changed file with 2 additions and 5 deletions.
7 changes: 2 additions & 5 deletions panpipes/python_scripts/make_spatialData_from_csv.py
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import os
from pathlib import Path
"""
this script copies the make_adata_from_csv.py that creates
ONE MUDATA PER SAMPLE, with in each ONE LAYER per modality
for cell-suspension, saves them to temp.
concatenation of the mudatas saved in tmp happens
in the concat_anndata.py script
This script is an adjustment of the make_adata_from_csv.py. It creates
ONE SPATIALDATA PER SAMPLE and saves them to temp.
"""

import sys
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