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Merge pull request #116 from FAIRdom/plasmo
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New page Plant Systems Biology
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PhilReedData authored Oct 29, 2024
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6 changes: 2 additions & 4 deletions _data/sidebars/main.yml
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url: /fairdom-in-use/plant-is-and-miappe
- title: NFDI4Health
url: /fairdom-in-use/nfdi4health
- title: PlaSMo, Plant Systems-biology Modelling
url: /fairdom-in-use/plasmo
- title: SARChI, Mechanistic modelling of health and epidemiology
url: /fairdom-in-use/sarchi
#- title: Plant Systems-biology Modelling
# url: /fairdom-in-use/plantsysbiomod
#- title: Systems Biology Modelling
# url: /fairdom-in-use/sysbiomod
- title: deCYPher
url: /fairdom-in-use/decypher
#- title: FAIRDOM Hubs
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7 changes: 0 additions & 7 deletions pages/fairdom_in_use/fairdom_projects/plantsysbiomod.md

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25 changes: 25 additions & 0 deletions pages/fairdom_in_use/fairdom_projects/plasmo.md
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---
title: PlaSMo, Plant Systems-biology Modelling
description: Case study of migration as a pragmatic exit strategy for research data preservation.
type: project
toc: false
---

{% include image.html file="fairdom_in_use/plasmo-logo.png" alt="PlaSMo Logo" max-width='12em' %}

FAIRDOM provides an opportunity for research project databases to continue to be available long after their original grants have ended.
By migrating a database to [FAIRDOMHub](/fairdom-in-use/fairdomhub), open research, data sharing and data re-use can continue to be offered.

PlaSMo stands for ‘Plant Systems-biology Modelling’ and the PlaSMo model repository was envisioned by the plant systems biology community in 2005 with the initial funding lasting until 2010.
The team devised an exit strategy to address the sustainability of the PlaSMo repository and preservation of its data.
Data was migrated to the public FAIRDOMHub repository using secured funding.
The migration became feasible following the introduction of the [FAIRDOM-SEEK](/fairdomseek) write API.

## More information

Visit the [PlaSMo model repository](https://fairdomhub.org/projects/129) and the [PlaSMo project description](https://fairdomhub.org/documents/36) on FAIRDOMHub.

For more details about the migration strategy, please see the paper:
Zielinski T, Hay J, Millar AJ. **The grant is dead, long live the data - migration as a pragmatic exit strategy for research data preservation.** Wellcome Open Res. 2019 Sep 23;4:104.
doi: [10.12688/wellcomeopenres.15341.2.](https://doi.org/10.12688%2Fwellcomeopenres.15341.2)
PMID: 31363499; PMCID: PMC6652102.

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