L2toL3 test added (#282)

* L2toL3 test added * 3.8 and 3.9 tests removed * tests only for 3.10 and 3.11 * troubleshooting * echo syntax changed * updated input file paths
GEUS-Glaciology-and-Climate · Aug 8, 2024 · 51194de · 51194de
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diff --git a/.github/workflows/process_test.yml b/.github/workflows/process_test.yml
@@ -11,7 +11,7 @@ jobs:
       - name: Install Python
         uses: actions/setup-python@v4
         with:
-          python-version: "3.8"        
+          python-version: "3.10"        
       - name: Checkout repo
         uses: actions/checkout@v3
         with:
@@ -41,23 +41,15 @@ jobs:
           for i in $(echo ${{ env.TEST_STATION }} | tr ' ' '\n'); do
             python3 $GITHUB_WORKSPACE/main/src/pypromice/process/get_l2.py -c $GITHUB_WORKSPACE/aws-l0/tx/config/$i.toml -i $GITHUB_WORKSPACE/aws-l0/tx -o $GITHUB_WORKSPACE/out/L0toL2/
           done
-#      - name: Run L0 to L2 processing
-#        env:
-#          TEST_STATION: KAN_U HUM
-#        shell: bash
-#        run: |
-#          mkdir $GITHUB_WORKSPACE/out/L2toL3/            
-#          for i in $(echo ${{ env.TEST_STATION }} | tr ' ' '\n'); do           
-#            python3 $GITHUB_WORKSPACE/main/src/pypromice/process/get_l2tol3.py -i $GITHUB_WORKSPACE/out/L0toL2/$i/$i_hour.nc -o $GITHUB_WORKSPACE/out/L2toL3 -t 60min
-#          done
-      - name: Run L0 to L3 processing
+      - name: Run L2 to L3 processing
         env:
           TEST_STATION: KAN_U HUM
         shell: bash
         run: |
-          mkdir $GITHUB_WORKSPACE/out/L0toL3/
+          mkdir $GITHUB_WORKSPACE/out/L2toL3/
           for i in $(echo ${{ env.TEST_STATION }} | tr ' ' '\n'); do
-            python3 $GITHUB_WORKSPACE/main/src/pypromice/process/get_l2.py -c $GITHUB_WORKSPACE/aws-l0/tx/config/$i.toml -i $GITHUB_WORKSPACE/aws-l0/tx -o $GITHUB_WORKSPACE/out/L2/
+            echo ${i}_hour.nc
+            python3 $GITHUB_WORKSPACE/main/src/pypromice/process/get_l2tol3.py -c $GITHUB_WORKSPACE/aws-l0/metadata/station_configurations/ -i $GITHUB_WORKSPACE/out/L0toL2/${i}/${i}_hour.nc -o $GITHUB_WORKSPACE/out/L2toL3/
           done
       - name: Upload test output
         uses: actions/upload-artifact@v3

diff --git a/.github/workflows/unit_test.yml b/.github/workflows/unit_test.yml
@@ -9,7 +9,7 @@ jobs:
     runs-on: ubuntu-latest
     strategy:
       matrix:
-        python_version: ['3.8','3.9','3.10']
+        python_version: ['3.10','3.11']
     steps:
       - name: Install Python
         uses: actions/setup-python@v4