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ICGC-TCGA-PanCancer · Jun 14, 2016 · 3fd0314 · 3fd0314
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diff --git a/MANIFEST b/MANIFEST
@@ -3,6 +3,7 @@ bin/bam_to_sra_sub.pl
 bin/bamToBw.pl
 bin/bwa_aln.pl
 bin/bwa_mem.pl
+bin/detectExtremeDepth.pl
 bin/diff_bams.pl
 bin/gnos_pull.pl
 bin/monitor.pl

diff --git a/docs.tar.gz b/docs.tar.gz
diff --git a/lib/PCAP.pm b/lib/PCAP.pm
@@ -80,6 +80,7 @@ const my %UPGRADE_PATH => ( # all earlier versions need full upgrade
                             '2.2.1' => '',
                             '2.3.0' => '',
                             '2.4.0' => '',
+                            '2.5.0' => '',
                           );
 
 sub license {