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FAQ
I have loaded a demo Rdata file, can I change the reference sequence?
It is not possible to change the reference sequence when loading a Rdata file. It is a fixed analysis with given parameters . To change the reference sequence, it will be necessary to load a fasta file and set the analysis with the desired reference sequence.
Do I have to reload my fasta file every time I scan? For example, if I only want to change the reference sequence? What about the query sequences?
It is not necessary to reload the fasta file. Go back to the Sequence filter tab and reparameterize the analysis (reference sequence and / or query sequences). Then restart the analysis.
I didn't use the application for a while and the background turned gray. Is this normal?
Yes it is. During a long period of inactivity, Shiny turns off the application to free up resources. The time of this period is configurable according to the deployment mode. Locally, this time is infinite. With ShinyProxy, it will be necessary to increase the heartbeat-timeout parameter in the application.yml file (ShinyProxy folder).By default, the application will be turned off after 60 seconds of inactivity.
The application turned gray when I was using it. Is this normal?
No, it's because there was a bug. In this case, you can open an issue with as much context as possible so we can fix the bug. We thank you in advance for this kind of feedback which allows us to guarantee the best user experience.