Enh/image io#75

Merged

acsenrafilho merged 45 commits intodevelopfrom

Aug 21, 2025

Commits on Aug 15, 2025

ENH: Refactor BrainAtlas class to remove hardcoded atlas data and improve atlas URL retrieval method
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Commits on Aug 16, 2025

ENH: Update set_image method to accept Union types and adjust test assertions to reflect ImageIO usage
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ENH: Refactor isotropic Gaussian and median functions to use clone_image and update test cases for ImageIO integration
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STY: Improve code readability by formatting long lines in MultiTE_ASLMapping and test cases
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STY: Format long lines in CBFMapping and test cases for improved readability
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ENH: Refactor ImageIO methods to improve image handling and add deep copy functionality; update test cases for consistency
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ENH: Update calculate_snr, calculate_mean_intensity, and analyze_image_properties to use ImageIO objects; adjust tests for compatibility
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ENH: Update image manipulation functions to use ImageIO objects; adjust tests for compatibility and error handling
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ENH: Update test cases in test_smooth_utils to use ImageIO objects for image handling; ensure compatibility with smoothing functions
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ENH: Refactor T2Scalar_ASLMapping to utilize ImageIO for brain mask handling and T2 maps; update tests for compatibility
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ENH: Refactor MultiDW_ASLMapping methods to improve readability and maintainability; adjust test cases for consistency
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ENH: Update functions to utilize ImageIO objects for image handling; improve type validation and error messages
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WIP: Refactor head_movement_correction to utilize ImageIO for reference volumes and ROI; update tests for compatibility
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Merge remote-tracking branch 'origin/main' into enh/image_io
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Commits on Aug 18, 2025

Commits on Aug 19, 2025

WIP: Adjusting more tests with ImageIO refactoring
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Commits on Aug 20, 2025

Commits on Aug 21, 2025