Ensure test database is created and expected migrations hasve been ru…

…n before importing any new terms
MRCIEU · Jan 12, 2024 · ca2cccf · ca2cccf
1 parent 013ff15
commit ca2cccf
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diff --git a/.github/workflows/check-for-new-mesh-terms.yml b/.github/workflows/check-for-new-mesh-terms.yml
@@ -27,6 +27,7 @@ jobs:
             - 3306:3306
           env:
             MYSQL_ROOT_PASSWORD: 'ci-db-pswd'
+            MYSQL_DATABASE: 'ci'
     steps:
     - uses: actions/checkout@v4
     - uses: actions/setup-python@v5

diff --git a/deploy/fabfile.py b/deploy/fabfile.py
@@ -707,6 +707,7 @@ def create_mesh_term_fixtures(env="dev", use_local_mode=False, project_dir=PROJE
         else:
             caller(f'wget -O {mesh_term_file_path} https://nlmpubs.nlm.nih.gov/projects/mesh/{year}/meshtrees/mtrees{year}.bin')
             if _exists_local(mesh_term_file_path, use_local_mode):
+                caller(f'{venv_dir}bin/python3 manage.py migrate --database=admin --noinput --settings=temmpo.settings.%s' % env)
                 caller(f'{venv_dir}bin/python3 manage.py loaddata {previous_fixture_file} --settings=temmpo.settings.{env}')
                 caller(f'{venv_dir}bin/python3 manage.py import_mesh_terms {mesh_term_file_path} {year} --settings=temmpo.settings.{env}')
                 caller(f'{venv_dir}bin/python3 manage.py dumpdata browser.MeshTerm --indent 4 --output {new_fixture_file_path} --settings=temmpo.settings.{env}')