added support for handling weird Siemens 1.5T data that doesnt have a… #14
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| name: Build and Upload Wheels | |
| on: [push] | |
| permissions: | |
| id-token: write # Grant the workflow permissions to use the id-token | |
| jobs: | |
| build-linux-wheels: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: ['3.9', '3.10', '3.11', '3.12'] | |
| architecture: [x86_64, i686, aarch64] | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Set up Docker Buildx | |
| uses: docker/setup-buildx-action@v1 | |
| - name: Install QEMU | |
| uses: docker/setup-qemu-action@v1 | |
| - name: Set up Python | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Set up Docker image | |
| run: | | |
| docker pull quay.io/pypa/manylinux2014_${{ matrix.architecture }} | |
| - name: Build wheels | |
| run: | | |
| docker run --rm -v $GITHUB_WORKSPACE:/project quay.io/pypa/manylinux2014_${{ matrix.architecture }} /bin/bash -c " | |
| yum install -y fftw-devel && \ | |
| mkdir -p /project/dist && \ | |
| for PYBIN in /opt/python/*${{ matrix.python-version }}*/bin; do | |
| if [ -d \$PYBIN ]; then | |
| echo Using Python binary from \$PYBIN >> /project/build.log | |
| \$PYBIN/python -m ensurepip >> /project/build.log 2>&1 && \ | |
| \$PYBIN/pip install -U pip setuptools wheel auditwheel pybind11 >> /project/build.log 2>&1 && \ | |
| cd /project && \ | |
| echo Building wheel with Python binary from \$PYBIN >> /project/build.log && \ | |
| \$PYBIN/python setup.py bdist_wheel >> /project/build.log 2>&1 && \ | |
| \$PYBIN/auditwheel repair dist/*.whl -w /project/dist >> /project/build.log 2>&1 | |
| fi | |
| done | |
| " | |
| - name: Output build logs | |
| run: | | |
| if [ -f $GITHUB_WORKSPACE/build.log ]; then cat $GITHUB_WORKSPACE/build.log; else echo "Build log not found"; fi | |
| - name: Verify wheels | |
| run: | | |
| ls -al $GITHUB_WORKSPACE/dist/ | |
| - name: Upload to PyPI | |
| uses: pypa/gh-action-pypi-publish@release/v1 | |
| with: | |
| password: ${{ secrets.PYPI_API_TOKEN }} | |
| build-macos-wheels: | |
| runs-on: macos-latest | |
| strategy: | |
| matrix: | |
| python-version: ['3.9', '3.10', '3.11', '3.12'] | |
| architecture: [x86_64, arm64] | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Set up Python | |
| run: | | |
| if [[ "${{ matrix.architecture }}" == "arm64" ]]; then | |
| arch -arm64 brew install pyenv | |
| arch -arm64 pyenv install ${{ matrix.python-version }} | |
| arch -arm64 pyenv global ${{ matrix.python-version }} | |
| echo "Python version set to $(python --version)" | |
| else | |
| brew install pyenv | |
| pyenv install ${{ matrix.python-version }} | |
| pyenv global ${{ matrix.python-version }} | |
| echo "Python version set to $(python --version)" | |
| fi | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip setuptools wheel pybind11 | |
| brew install fftw | |
| - name: Build wheels | |
| env: | |
| ARCHFLAGS: "-arch ${{ matrix.architecture }}" | |
| run: | | |
| mkdir -p $GITHUB_WORKSPACE/dist | |
| if [[ "${{ matrix.architecture }}" == "arm64" ]]; then | |
| arch -arm64 python setup.py bdist_wheel | |
| else | |
| python setup.py bdist_wheel | |
| fi | |
| - name: Repair wheels | |
| env: | |
| ARCHFLAGS: "-arch ${{ matrix.architecture }}" | |
| run: | | |
| pip install delocate | |
| if [[ "${{ matrix.architecture }}" == "arm64" ]]; then | |
| arch -arm64 delocate-listdeps $GITHUB_WORKSPACE/dist/*.whl # lists library dependencies | |
| arch -arm64 delocate-wheel $GITHUB_WORKSPACE/dist/*.whl # copies library dependencies into the wheel | |
| else | |
| delocate-listdeps $GITHUB_WORKSPACE/dist/*.whl # lists library dependencies | |
| delocate-wheel $GITHUB_WORKSPACE/dist/*.whl # copies library dependencies into the wheel | |
| fi | |
| - name: Verify wheels | |
| run: | | |
| ls -al $GITHUB_WORKSPACE/dist/ | |
| - name: Upload to PyPI | |
| uses: pypa/gh-action-pypi-publish@release/v1 | |
| with: | |
| password: ${{ secrets.PYPI_API_TOKEN }} | |
| # build-windows-wheels: | |
| # runs-on: windows-latest | |
| # strategy: | |
| # matrix: | |
| # python-version: ['3.9', '3.10', '3.11', '3.12'] | |
| # steps: | |
| # - uses: actions/checkout@v2 | |
| # - name: Set up Python | |
| # uses: actions/setup-python@v2 | |
| # with: | |
| # python-version: ${{ matrix.python-version }} | |
| # - name: Install Miniconda | |
| # uses: conda-incubator/setup-miniconda@v2 | |
| # with: | |
| # auto-update-conda: true | |
| # python-version: ${{ matrix.python-version }} | |
| # activate-environment: myenv | |
| # - name: Install FFTW | |
| # run: | | |
| # conda install -c conda-forge fftw | |
| # - name: Install dependencies | |
| # run: | | |
| # python -m pip install --upgrade pip setuptools wheel pybind11 | |
| # - name: Ensure Visual C++ Build Tools are Installed | |
| # run: | | |
| # choco install visualstudio2019buildtools --package-parameters "--add Microsoft.VisualStudio.Workload.VCTools --includeRecommended --includeOptional" | |
| # - name: Build wheels | |
| # run: | | |
| # mkdir -p $GITHUB_WORKSPACE/dist | |
| # python setup.py bdist_wheel 2>&1 | tee $GITHUB_WORKSPACE/build.log | |
| # - name: Output build logs | |
| # run: | | |
| # if [ -f $GITHUB_WORKSPACE/build.log ]; then cat $GITHUB_WORKSPACE/build.log; else echo “Build log not found”; fi | |
| # - name: Verify wheels | |
| # run: | | |
| # ls -al $GITHUB_WORKSPACE/dist/ | |
| # - name: Upload to PyPI | |
| # uses: pypa/gh-action-pypi-publish@release/v1 | |
| # with: | |
| # password: ${{ secrets.PYPI_API_TOKEN }} |