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removed input to bakta process
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hkaspersen committed Jan 4, 2024
1 parent 9bee7a9 commit 3d2ffa6
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion workflows/CORE_GENE.nf
Original file line number Diff line number Diff line change
Expand Up @@ -16,7 +16,7 @@ workflow CORE_GENE {
.splitCsv(header:true, sep:",")
.map { file(it.path, checkIfExists: true) }

BAKTA(assemblies_ch, params.bakta_db)
BAKTA(assemblies_ch)

if (params.qc) {
refdb_ch = Channel.fromPath(params.refdb)
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