bumped version of panaroo

NorwegianVeterinaryInstitute · Feb 7, 2024 · 7bdc0aa · 7bdc0aa
1 parent 28a5466
commit 7bdc0aa
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Showing 2 changed files with 5 additions and 5 deletions.
diff --git a/bin/core_gene_report.Rmd b/bin/core_gene_report.Rmd
@@ -195,7 +195,7 @@ tool_data <- data.frame(
            "Snp-sites",
            "IQTree"),
   Version = c("1.9.1",
-              "1.2.9",
+              "1.3.4",
               "0.8.2",
               "2.5.1",
               "2.2.6")

diff --git a/modules/PANAROO.nf b/modules/PANAROO.nf
@@ -1,6 +1,6 @@
 process PANAROO_QC {
-	conda (params.enable_conda ? 'bioconda::panaroo=1.2.9' : null)
-	container 'quay.io/biocontainers/panaroo:1.2.9--pyhdfd78af_0'
+	conda (params.enable_conda ? 'bioconda::panaroo=1.3.4' : null)
+	container 'quay.io/biocontainers/panaroo:1.3.4--pyhdfd78af_0'
 
 	label 'process_high_memory_time'
 
@@ -22,8 +22,8 @@ process PANAROO_QC {
 }
 
 process PANAROO_PANGENOME {
-	conda (params.enable_conda ? 'bioconda::panaroo=1.2.9' : null)
-        container 'quay.io/biocontainers/panaroo:1.2.9--pyhdfd78af_0'
+	conda (params.enable_conda ? 'bioconda::panaroo=1.3.4' : null)
+        container 'quay.io/biocontainers/panaroo:1.3.4--pyhdfd78af_0'
 
 	label 'process_high_cpu_time'