add missing tuple statement

Pathogen-Genomics-Cymru · Mar 26, 2024 · 00af7e7 · 00af7e7
1 parent c9149c5
commit 00af7e7
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/modules/preprocessingModules.nf b/modules/preprocessingModules.nf
@@ -13,7 +13,7 @@ process checkBamValidity {
     publishDir "${params.output_dir}/${bam_file.getBaseName()}", mode: 'copy', overwrite: 'true', pattern: '*{_err.json,_report.json}'
 
     input:
-    path(bam_file), path(software_json)
+    tuple path(bam_file), path(software_json)
 
     output:
     tuple path(bam_file), stdout, path(software_json), emit: checkValidity_bam