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@annacprice annacprice released this 14 Dec 16:08
· 349 commits to main since this release
v0.9.5
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Learn about vigilant mode.

Release for UAT

Updates include:

  • Afanc is now used for speciation and downstream reporting
  • Mykrobe runs as an independent process
  • Uses the new NCBI taxonomy for Mycobacteriaceae (Mycobacterium, Mycobacteroides, Mycolicibacter, Mycolicibacterium, and Mycolicibacillus)
  • Gnomonicus and AMR catalogues have been updated
  • Updates to the reporting

Bug fixes:
#15, #16, #18, #19, #20, #21, #22, #26, #27, #31, #32, #33

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