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Release 0.36 #829

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@penelopeysm penelopeysm commented Mar 5, 2025

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codecov bot commented Mar 5, 2025

Codecov Report

Attention: Patch coverage is 76.47059% with 32 lines in your changes missing coverage. Please review.

Project coverage is 84.87%. Comparing base (c7bdc3f) to head (e410f47).

Files with missing lines Patch % Lines
src/varinfo.jl 74.57% 30 Missing ⚠️
src/utils.jl 60.00% 2 Missing ⚠️
Additional details and impacted files
@@            Coverage Diff             @@
##             main     #829      +/-   ##
==========================================
- Coverage   84.92%   84.87%   -0.05%     
==========================================
  Files          34       34              
  Lines        3814     3848      +34     
==========================================
+ Hits         3239     3266      +27     
- Misses        575      582       +7     

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Pull Request Test Coverage Report for Build 13673973133

Details

  • 0 of 0 changed or added relevant lines in 0 files are covered.
  • 438 unchanged lines in 16 files lost coverage.
  • Overall coverage decreased (-11.5%) to 73.166%

Files with Coverage Reduction New Missed Lines %
ext/DynamicPPLEnzymeCoreExt.jl 1 0.0%
src/experimental.jl 3 0.0%
src/submodel_macro.jl 3 81.08%
src/varinfo.jl 4 82.82%
src/threadsafe.jl 5 67.62%
src/varnamedvector.jl 6 90.37%
src/simple_varinfo.jl 7 78.95%
src/context_implementations.jl 11 81.25%
src/model.jl 11 84.17%
ext/DynamicPPLJETExt.jl 16 0.0%
Totals Coverage Status
Change from base Build 13634518410: -11.5%
Covered Lines: 2792
Relevant Lines: 3816

💛 - Coveralls

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@coveralls
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Pull Request Test Coverage Report for Build 13673973133

Details

  • 0 of 0 changed or added relevant lines in 0 files are covered.
  • 438 unchanged lines in 16 files lost coverage.
  • Overall coverage decreased (-11.5%) to 73.166%

Files with Coverage Reduction New Missed Lines %
ext/DynamicPPLEnzymeCoreExt.jl 1 0.0%
src/experimental.jl 3 0.0%
src/submodel_macro.jl 3 81.08%
src/varinfo.jl 4 82.82%
src/threadsafe.jl 5 67.62%
src/varnamedvector.jl 6 90.37%
src/simple_varinfo.jl 7 78.95%
src/context_implementations.jl 11 81.25%
src/model.jl 11 84.17%
ext/DynamicPPLJETExt.jl 16 0.0%
Totals Coverage Status
Change from base Build 13634518410: -11.5%
Covered Lines: 2792
Relevant Lines: 3816

💛 - Coveralls

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coveralls commented Mar 5, 2025

Pull Request Test Coverage Report for Build 14404602295

Details

  • 89 of 136 (65.44%) changed or added relevant lines in 8 files are covered.
  • 1201 unchanged lines in 26 files lost coverage.
  • Overall coverage decreased (-0.05%) to 84.964%

Changes Missing Coverage Covered Lines Changed/Added Lines %
src/sampler.jl 0 1 0.0%
src/simple_varinfo.jl 0 1 0.0%
src/test_utils/contexts.jl 0 1 0.0%
src/utils.jl 3 5 60.0%
src/varinfo.jl 76 118 64.41%
Files with Coverage Reduction New Missed Lines %
src/DynamicPPL.jl 1 90.91%
src/submodel_macro.jl 2 82.35%
src/extract_priors.jl 5 53.57%
src/test_utils/model_interface.jl 5 22.22%
src/test_utils/varinfo.jl 5 76.19%
src/values_as_in_model.jl 6 43.9%
src/logdensityfunction.jl 7 64.44%
src/model_utils.jl 7 7.14%
src/distribution_wrappers.jl 13 9.76%
src/model.jl 13 80.0%
Totals Coverage Status
Change from base Build 14392526425: -0.05%
Covered Lines: 3266
Relevant Lines: 3844

💛 - Coveralls

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github-actions bot commented Mar 22, 2025

Benchmark Report for Commit e410f47

Computer Information

Julia Version 1.11.4
Commit 8561cc3d68d (2025-03-10 11:36 UTC)
Build Info:
  Official https://julialang.org/ release
Platform Info:
  OS: Linux (x86_64-linux-gnu)
  CPU: 4 × AMD EPYC 7763 64-Core Processor
  WORD_SIZE: 64
  LLVM: libLLVM-16.0.6 (ORCJIT, znver3)
Threads: 1 default, 0 interactive, 1 GC (on 4 virtual cores)

Benchmark Results

|                 Model | Dimension |  AD Backend |      VarInfo Type | Linked | Eval Time / Ref Time | AD Time / Eval Time |
|-----------------------|-----------|-------------|-------------------|--------|----------------------|---------------------|
| Simple assume observe |         1 | forwarddiff |             typed |  false |                  9.5 |                 1.6 |
|           Smorgasbord |       201 | forwarddiff |             typed |  false |                636.8 |                40.6 |
|           Smorgasbord |       201 | forwarddiff | simple_namedtuple |   true |                428.7 |                44.7 |
|           Smorgasbord |       201 | forwarddiff |           untyped |   true |               1224.3 |                27.6 |
|           Smorgasbord |       201 | forwarddiff |       simple_dict |   true |               4046.7 |                19.3 |
|           Smorgasbord |       201 | reversediff |             typed |   true |               1470.3 |                28.8 |
|           Smorgasbord |       201 |    mooncake |             typed |   true |                948.2 |                 5.3 |
|    Loop univariate 1k |      1000 |    mooncake |             typed |   true |               5469.4 |                 4.3 |
|       Multivariate 1k |      1000 |    mooncake |             typed |   true |               1128.4 |                 8.3 |
|   Loop univariate 10k |     10000 |    mooncake |             typed |   true |              60886.3 |                 3.8 |
|      Multivariate 10k |     10000 |    mooncake |             typed |   true |               8958.5 |                 9.6 |
|               Dynamic |        10 |    mooncake |             typed |   true |                133.3 |                12.9 |
|              Submodel |         1 |    mooncake |             typed |   true |                 25.1 |                 9.2 |
|                   LDA |        12 | reversediff |             typed |   true |                416.3 |                 5.8 |

penelopeysm and others added 6 commits March 25, 2025 19:31
* AbstractPPL 0.11; change prefixing behaviour

* Use DynamicPPL.prefix rather than overloading
* Unify {Untyped,Typed}{Vector,}VarInfo constructors

* Update invocations

* NTVarInfo

* Fix tests

* More fixes

* Fixes

* Fixes

* Fixes

* Use lowercase functions, don't deprecate VarInfo

* Rewrite VarInfo docstring

* Fix methods

* Fix methods (really)
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3 participants