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Fix all the links following the repo migration. #79

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Fix all the links following the repo migration. #79

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8 changes: 4 additions & 4 deletions mkdocs-project-dir/docs/Clusters/Michael.md
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Expand Up @@ -137,8 +137,8 @@ help you find information about your jobs after they have run.
given job.

These utilities live in GitHub at
<https://github.com/UCL-RITS/go-clustertools> and
<https://github.com/UCL-RITS/rcps-cluster-scripts>
<https://github.com/UCL-ARC/go-clustertools> and
<https://github.com/UCL-ARC/rcps-cluster-scripts>

## Software

Expand All @@ -160,7 +160,7 @@ project.

To request software installs, email us at the [support address
below](#Support) or open an issue on our
[GitHub](https://github.com/UCL-RITS/rcps-buildscripts/issues). You can
[GitHub](https://github.com/UCL-ARC/rcps-buildscripts/issues). You can
see what software has already been requested in the Github issues and
can add a comment if you're also interested in something already
requested.
Expand Down Expand Up @@ -211,7 +211,7 @@ Please let us know your username when you ask to be added to a group.
add you. We will add you to the `legvasp5` or `legvasp6` reserved
application groups depending on which versions you are licensed for.
You may also install your own copy in your home, and we provide a simple
[build script on Github](https://github.com/UCL-RITS/rcps-buildscripts/blob/master/vasp_individual_install)
[build script on Github](https://github.com/UCL-ARC/rcps-buildscripts/blob/master/vasp_individual_install)
(tested with VASP 5.4.4, no patches). You need to download the VASP
source code and then you can run the script following the
instructions at the top.
Expand Down
8 changes: 4 additions & 4 deletions mkdocs-project-dir/docs/Clusters/Young.md
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Expand Up @@ -171,8 +171,8 @@ help you find information about your jobs after they have run.
given job.

These utilities live in GitHub at
<https://github.com/UCL-RITS/go-clustertools> and
<https://github.com/UCL-RITS/rcps-cluster-scripts>
<https://github.com/UCL-ARC/go-clustertools> and
<https://github.com/UCL-ARC/rcps-cluster-scripts>


### Known problems
Expand Down Expand Up @@ -250,7 +250,7 @@ Unloading mpi/intel/2018/update3/intel
### Requesting software installs

To request software installs, email us at the [support address below](#Support) or open an issue on our
[GitHub](https://github.com/UCL-RITS/rcps-buildscripts/issues). You can
[GitHub](https://github.com/UCL-ARC/rcps-buildscripts/issues). You can
see what software has already been requested in the Github issues and
can add a comment if you're also interested in something already
requested.
Expand Down Expand Up @@ -303,7 +303,7 @@ Please let us know your username when you ask to be added to a group.
add you. We will add you to the `legvasp5` or `legvasp6` reserved
application groups depending on which versions you are licensed for.
You may also install your own copy in your home, and we provide a simple
[build script on Github](https://github.com/UCL-RITS/rcps-buildscripts/blob/master/vasp_individual_install)
[build script on Github](https://github.com/UCL-ARC/rcps-buildscripts/blob/master/vasp_individual_install)
(tested with VASP 5.4.4, no patches). You need to download the VASP
source code and then you can run the script following the
instructions at the top.
Expand Down
2 changes: 1 addition & 1 deletion mkdocs-project-dir/docs/Software_Guides/Installing_Software.md
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Expand Up @@ -18,7 +18,7 @@ in your ecosystem.
your home space? We can provide some assistance here if you tell us what problems you are
encountering.

The requests will be added to the issues in our [buildscripts repository](https://github.com/UCL-RITS/rcps-buildscripts). The buildscripts themselves are there too, so you can see how we
The requests will be added to the issues in our [buildscripts repository](https://github.com/UCL-ARC/rcps-buildscripts). The buildscripts themselves are there too, so you can see how we
built and installed our central software stack.

You can install software yourself in your space on the cluster. Below are some tips for
Expand Down
2 changes: 1 addition & 1 deletion mkdocs-project-dir/docs/Software_Guides/Other_Software.md
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Expand Up @@ -1599,7 +1599,7 @@ gerun vasp_std > vasp_output.$JOB_ID

Note: although you can run VASP using the default Intel 2018 compiler this can lead to numerical errors in some types of simulation. In those cases we recommend switching to the specific compiler and MPI version used to build that install (mentioned at the end of the module name). We do this in the example above.

Building your own VASP: You may also install your own copy of VASP in your home if you have access to the source, and we provide a [simple VASP individual install script](https://github.com/UCL-RITS/rcps-buildscripts/blob/master/vasp_individual_install) (tested with VASP 5.4.4, no patches). You need to download the VASP source code into your home directory and then you can run the script following the instructions at the top.
Building your own VASP: You may also install your own copy of VASP in your home if you have access to the source, and we provide a [simple VASP individual install script](https://github.com/UCL-ARC/rcps-buildscripts/blob/master/vasp_individual_install) (tested with VASP 5.4.4, no patches). You need to download the VASP source code into your home directory and then you can run the script following the instructions at the top.

#### VASP 6

Expand Down
6 changes: 3 additions & 3 deletions mkdocs-project-dir/docs/Supplementary/Compiling_Your_Code.md
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Expand Up @@ -253,9 +253,9 @@ pip3 install --user <python3pkg>

These will install into `.python2local` or `.python3local` directories in your home directory, respectively.

To see what is already installed, the [Python-shared list](https://github.com/UCL-RITS/rcps-buildscripts/blob/master/lists/python-shared.list)
shows what is installed for both Python2 and 3, while the [Python2 list](https://github.com/UCL-RITS/rcps-buildscripts/blob/master/lists/python-2.list)
and [Python3 list](https://github.com/UCL-RITS/rcps-buildscripts/blob/master/lists/python-3.list)
To see what is already installed, the [Python-shared list](https://github.com/UCL-ARC/rcps-buildscripts/blob/master/lists/python-shared.list)
shows what is installed for both Python2 and 3, while the [Python2 list](https://github.com/UCL-ARC/rcps-buildscripts/blob/master/lists/python-2.list)
and [Python3 list](https://github.com/UCL-ARC/rcps-buildscripts/blob/master/lists/python-3.list)
show what is only installed for one or the other. (There may also be
prereqs that aren't listed explicitly - pip will tell you if something
is already installed as long as you have the recommended module bundle
Expand Down