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@UMCUGenetics

UMCU Genetics

Repository for genetics code

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  1. RNASeq-NF RNASeq-NF Public

    RNASeq-NF is an NGS analysis pipeline for RNA expression quantification.

    Nextflow 8 8

  2. NF-IAP NF-IAP Public

    Illumina Analysis Pipeline in Nextflow

    Nextflow 3 5

  3. NextflowModules NextflowModules Public

    UMCU Genetics Nextflow modules

    Nextflow 28 10

Repositories

Showing 10 of 146 repositories
  • Epi2Me_wf-human-variation Public Forked from epi2me-labs/wf-human-variation
    UMCUGenetics/Epi2Me_wf-human-variation’s past year of commit activity
    Nextflow 0 57 0 1 Updated Mar 5, 2025
  • CustomModules Public
    UMCUGenetics/CustomModules’s past year of commit activity
    R 1 MIT 0 0 2 Updated Mar 4, 2025
  • clarity_epp Public

    Clarity LIMS epp scripts

    UMCUGenetics/clarity_epp’s past year of commit activity
    Python 1 MIT 0 0 0 Updated Mar 4, 2025
  • Dx_tracks Public
    UMCUGenetics/Dx_tracks’s past year of commit activity
    Verilog 2 0 2 0 Updated Mar 3, 2025
  • DxNextflowRNA Public
    UMCUGenetics/DxNextflowRNA’s past year of commit activity
    R 0 0 0 4 Updated Mar 3, 2025
  • GIABEval Public

    Genome-in-a-bottle evaluation tool to determine statistics

    UMCUGenetics/GIABEval’s past year of commit activity
    Nextflow 1 MIT 0 0 1 Updated Feb 28, 2025
  • DIMS Public

    Direct Infusion Mass Spectrometry pipeline

    UMCUGenetics/DIMS’s past year of commit activity
    Nextflow 2 MIT 2 11 1 Updated Feb 26, 2025
  • DxNextflowWES Public

    Genome Diagnostics Nextflow WES workflow

    UMCUGenetics/DxNextflowWES’s past year of commit activity
    Nextflow 6 MIT 1 6 0 Updated Feb 25, 2025
  • USEQ_tools Public

    Utility scripts to work with Genologics Clarity LIMS

    UMCUGenetics/USEQ_tools’s past year of commit activity
    Python 2 MIT 0 0 2 Updated Feb 17, 2025
  • AdvancedBioinformaticsCourse Public
    UMCUGenetics/AdvancedBioinformaticsCourse’s past year of commit activity
    4 CC0-1.0 0 0 0 Updated Feb 16, 2025
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