adjusted association coefficient sensu Jucker-2003

ViennaRNA · Jan 30, 2018 · 8ea577e · 8ea577e
1 parent 648a0a3
commit 8ea577e
Showing 1 changed file with 3 additions and 2 deletions.
diff --git a/scripts/crossrates.pl b/scripts/crossrates.pl
@@ -1,6 +1,6 @@
 #!/usr/bin/env perl
 # -*-CPerl-*-
-# Last changed Time-stamp: <2017-12-20 09:58:51 mtw>
+# Last changed Time-stamp: <2018-01-30 18:54:15 mtw>
 
 use Getopt::Long;
 use Data::Dumper;
@@ -30,7 +30,8 @@
 my $BindingBonus=0.;
 my $ymlminmap=undef;
 my $has_map=0;
-my $Aa=600;  # association/dissociation rate
+my $Aa=170000;  # association/dissociation rate sensu Jucker-2003
+                # (k_2 in table 1 and eq 5)
 
 Getopt::Long::config('no_ignore_case');
 pod2usage(-verbose => 1)