Update FlyBase Configuration #3
Workflow file for this run
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| name: Update FlyBase Configuration | |
| on: | |
| workflow_dispatch: | |
| inputs: | |
| FB-release: | |
| required: true | |
| jobs: | |
| update-conf: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: "Checkout Alliance BLAST Service Configuration" | |
| uses: actions/checkout@v4 | |
| with: | |
| path: agr_blast_service_configuration | |
| - name: "Checkout FlyBase BLAST Configuration" | |
| run: | | |
| git clone https://github.com/FlyBase/blast-db-configuration.git flybase-blast-db-configuration | |
| - name: Copy configuration files | |
| run: | | |
| cd flybase-blast-db-configuration/conf && \ | |
| tar cf - *.json | (cd ../../agr_blast_service_configuration/conf/FB/; tar xvBpf -) | |
| - name: Create PR for updated FlyBase conf files | |
| uses: peter-evans/create-pull-request@v7 | |
| with: | |
| add-paths: | | |
| agr_blast_service_configuration/conf/FB/*.json | |
| commit-message: ${{ github.event.inputs.FB-release }} BLAST config | |
| branch: ${{ github.event.inputs.FB-release }}-blast-config-update | |
| delete-branch: true | |
| title: '[Update] ${{ github.event.inputs.FB-release }} BLAST config' | |
| body: | | |
| ${{ github.event.inputs.FB-release }} BLAST config | |
| draft: false |