WIP reworking pyproject.toml so that pytest unit tests can be run

Pipfile

@@ -26,7 +26,7 @@ python-dateutil = ">=2.8"
 pyvis = ">=0.1.9"
 rdflib = ">=6.1"
 requests = ">=2.27"
-scikit-learn = "==1.1.2"
+scikit-learn = "==1.1.3"
 scipy = ">=1.8.0"
 statsmodels = ">=0.13"
 tqdm = ">=4.63"
@@ -55,12 +55,12 @@ pylint = ">=2.12"
 pymdown-extensions = ">=9.2"
 pytest = ">=7.1"
 responses = ">=0.19"
-scikit-learn = ">=1.0"
+scikit-learn = ">=1.1"
 selenium = ">=4.1"
 twine = ">=3.8"
 types-python-dateutil = ">=2.8"
 types-requests = ">=2.27"
 xmltodict = ">=0.12"
 
 [requires]
-python_version = "3.10"
+python_version = "3.7"

README.md

@@ -6,9 +6,7 @@
 ![GitHub commit activity](https://img.shields.io/github/commit-activity/w/DerwenAI/kglab?style=plastic)
 [![Checked with mypy](http://www.mypy-lang.org/static/mypy_badge.svg)](http://mypy-lang.org/)
 [![security: bandit](https://img.shields.io/badge/security-bandit-yellow.svg)](https://github.com/PyCQA/bandit)
-[![Language grade: Python](https://img.shields.io/lgtm/grade/python/g/DerwenAI/kglab.svg?logo=lgtm&logoWidth=18)](https://lgtm.com/projects/g/DerwenAI/kglab/context:python)
 ![CI](https://github.com/DerwenAI/kglab/workflows/CI/badge.svg)
-[![Docker Pulls](https://img.shields.io/docker/pulls/derwenai/kglab.svg?maxAge=604800)](https://hub.docker.com/r/derwenai/kglab/)
 ![downloads](https://img.shields.io/pypi/dm/kglab)
 ![sponsor](https://img.shields.io/github/sponsors/ceteri)
 
@@ -38,53 +36,59 @@ Morph-KGC, pythonPSL, and many more.
 See the ["Getting Started"](https://derwen.ai/docs/kgl/start/)
 section of the online documentation.
 
-## Useing kglab as a package for your project
 
-### We recommend installing from [PyPi](https://pypi.python.org/pypi/kglab):
+### Using `kglab` as a library for your Python project
+
+We recommend installing from [PyPi](https://pypi.python.org/pypi/kglab) or [conda](https://anaconda.org/anaconda/conda):
+
+#### `pip`
 
-#### pip
 ```bash
 python3 -m pip install kglab
 ```
 
-#### pipenv
-```bash
-pipenv install kglab
-```
+#### `pipenv`
 
-#### poetry
 ```bash
-potery add kglab
+pipenv install kglab
 ```
 
-#### conda
+#### `conda`
 ```bash
 conda env create -n kglab
 conda activate kglab
 pip install kglab
 ```
 
 ### Or, install from source:
+
 If you work directly from this Git repo, be sure to install the 
 dependencies:
+
 #### pip
+
 ```bash
 python3 -m pip install -U pip wheel
 python3 -m pip install -r requirements.txt
 ```
 
 #### pipenv
+
 ```bash
 pipenv install --dev
-# NEED TO HAVE a Pipfile
 ```
+
 Alternatively, to install dependencies using `conda`:
+
 ```bash
 conda env create -f environment.yml --force
 conda activate kglab
 ```
 
+### Sample Code
+
 Then to run some simple uses of this library:
+
 ```python
 import kglab
 
@@ -129,12 +133,14 @@ Also, container images for each release are available on DockerHub:
 <https://hub.docker.com/repository/docker/derwenai/kglab>
 
 To build a container image and run it for the tutorials:
+
 ```bash
 docker build --pull --rm -f "docker/Dockerfile" -t kglab:latest .
 docker run -p 8888:8888 -it kglab
 ```
 
 To build and run a container image for testing:
+
 ```bash
 docker build --pull --rm -f "docker/testsuite.Dockerfile" -t kglabtest:latest .
 docker run --rm -it kglabtest
@@ -193,7 +199,7 @@ Source code for **kglab** plus its logo, documentation, and examples
 have an [MIT license](https://spdx.org/licenses/MIT.html) which is
 succinct and simplifies use in commercial applications.
 
-All materials herein are Copyright &copy; 2020-2022 Derwen, Inc.
+All materials herein are Copyright &copy; 2020-2023 Derwen, Inc.
 </details>
 
 
@@ -234,15 +240,15 @@ and to our contributors:
 [@louisguitton](https://github.com/louisguitton),
 [@tomaarsen](https://github.com/tomaarsen),
 [@Mec-iS](https://github.com/Mec-iS),
-[@cutterkom](https://github.com/cutterkom),
-[@RishiKumarRay](https://github.com/RishiKumarRay),
+[@jake-aft](https://github.com/jake-aft),
 [@Tpt](https://github.com/Tpt),
 [@ArenasGuerreroJulian](https://github.com/ArenasGuerreroJulian),
 [@fils](https://github.com/fils),
+[@cutterkom](https://github.com/cutterkom),
+[@RishiKumarRay](https://github.com/RishiKumarRay),
 [@gauravjaglan](https://github.com/gauravjaglan),
 [@pebbie](https://github.com/pebbie),
 [@CatChenal](https://github.com/CatChenal),
-[@jake-aft](https://github.com/jake-aft),
 [@dmoore247](https://github.com/dmoore247),
 plus general support from [Derwen, Inc.](https://derwen.ai/);
 the [Knowledge Graph Conference](https://www.knowledgegraph.tech/)

for_poetry/README.md

@@ -0,0 +1,5 @@
+#### `poetry`
+
+```bash
+poetry add kglab
+```

for_poetry/pyproject.toml

@@ -0,0 +1,148 @@
+
+
+[tool.poetry]
+name = "kglab"
+version = "0.6.7"
+description = "a simple abstraction layer in Python for building knowledge graphs"
+license = "MIT"
+authors = ["Paco Nathan"]
+maintainers = ["kglab contributors"]
+repository = "https://github.com/DerwenAI/kglab"
+homepage = "https//derwen.ai/docs/kgl/"
+readme = "README.md"
+documentation = "https://derwen.ai/docs/kgl/"
+keywords = [
+    "controlled vocabulary",
+    "cugraph",
+    "deep learning",
+    "embedding",
+    "gpu",
+    "graph algorithms",
+    "igraph",
+    "inference",
+    "interactive visualization",
+    "json-ld",
+    "knowledge graph",
+    "managing namespaces",
+    "morph-kgc",
+    "n3",
+    "networkx",
+    "owl",
+    "pandas",
+    "parquet",
+    "probabilistic soft logic",
+    "psl",
+    "pyvis",
+    "rapids",
+    "rdf",
+    "rml",
+    "roam research",
+    "serialization",
+    "shacl",
+    "skos",
+    "sparql",
+    "statistical relational learning",
+    "topology",
+    "turtle",
+    "validation"
+    ]
+classifiers = [
+    "Programming Language :: Python",
+    "Programming Language :: Python :: 3 :: Only",
+    "Programming Language :: Python :: 3.7",
+    "Programming Language :: Python :: 3.8",
+    "Programming Language :: Python :: 3.9",
+    "Programming Language :: Python :: 3.10",
+    "Operating System :: OS Independent",
+    "License :: OSI Approved :: MIT License",
+    "Development Status :: 5 - Production/Stable",
+    "Intended Audience :: Developers",
+    "Intended Audience :: Education",
+    "Intended Audience :: Information Technology",
+    "Intended Audience :: Science/Research",
+    "Topic :: Scientific/Engineering :: Artificial Intelligence",
+    "Topic :: Scientific/Engineering :: Human Machine Interfaces",
+    "Topic :: Scientific/Engineering :: Information Analysis",
+    "Topic :: Software Development :: Libraries :: Python Modules",
+    "Topic :: Text Processing :: Indexing"
+    ]
+
+
+[tool.poetry.dependencies]
+python = "^3.10"
+aiohttp = "^3.8.1"
+chocolate = "^0.0.2"
+csvwlib = "^0.3.2"
+cryptography = "^38.0.1"
+decorator = "^5.1.1"
+fsspec = {extras = ["gs", "s3"], version = "^2022.8.2"}
+gcsfs = "^2022.8.2"
+icecream = "^2.1.3"
+morph-kgc = "^2.2.0"
+networkx = "^2.8.6"
+numpy = "^1.23.3"
+owlrl = "^6.0.2"
+oxrdflib = "^0.3.2"
+pandas = "^1.4.4"
+pslpython = "^2.3.0"
+pyarrow = "^9.0.0"
+pynvml = "^11.4.1"
+pyshacl = "^0.20.0"
+python-dateutil = "^2.8.2"
+pyvis = "^0.2.1"
+rdflib = "^6.2.0"
+requests = "^2.28.1"
+tqdm = "^4.64.1"
+urlpath = "^1.2.0"
+bandit = "^1.7.4"
+codespell = "^2.2.1"
+coverage = "^6.4.4"
+Flask = "^2.2.2"
+grayskull = "^1.8.3"
+mistune = "^2.0.4"
+mkdocs-git-revision-date-plugin = "^0.3.2"
+mkdocs-material = "^8.5.1"
+pipdeptree = "^2.3.1"
+Pygments = "^2.13.0"
+pymdown-extensions = "^9.5"
+responses = "^0.21.0"
+selenium = "^4.4.3"
+twine = "^4.0.1"
+types-python-dateutil = "^2.8.19"
+types-requests = "^2.28.10"
+wheel = "^0.37.1"
+xmltodict = "^0.13.0"
+
+
+[tool.poetry.group.dev.dependencies]
+pytest = "^7.1.3"
+pre-commit = "^2.20.0"
+mypy = "^0.971"
+black = "^22.8.0"
+flake8 = "^5.0.4"
+mypy = "^0.971"
+pylint = "^2.15.2"
+flake8-pylint = "^0.1.3"
+bandit = "^1.7.4"
+flake8-bandit = "^4.1.1"
+mkdocs-git-revision-date-plugin = "^0.3.2"
+mkdocs-material = "^8.5.1"
+
+
+[tool.poetry.group.tut.dependencies]
+cairocffi = "^1.3"
+gensim = "^3.8"
+igraph = "^0.9"
+jupyterlab = "^3.1.4"
+leidenalg = "^0.8"
+matplotlib = "^3.3.4"
+pylev = "^1.3"
+
+tool.poetry.scripts = [
+    "Makefile = Makefile:main",
+]
+
+
+[build-system]
+requires = ["poetry-core"]
+build-backend = "poetry.core.masonry.api"