Skip to content

Releases: ansh-info/AIAgents4Pharma

v1.1.0

05 Feb 12:03
8e5cddc
Compare
Choose a tag to compare

1.1.0 (2025-02-05)

Bug Fixes

Features

  • Add tool for extracting annotions of species in an ODE model (#81) (eb27e13)

v1.0.0

29 Jan 19:12
Compare
Choose a tag to compare

1.0.0 (2025-01-29)

Bug Fixes

  • init paths for PyPI (c69a767)
  • add folder for talk2competitors (a6c9a9d)
  • add mkdocs-deploy yml (0729f33)
  • add model validator for the tool model_description (df529b6)
  • add OPENAI_API_KEY as env secrets (1781bdd)
  • add requirements.txt (ce58812)
  • add semantic-release (31751b7)
  • add the toml file for T2B (9ad2b91)
  • add upload otpion and accespt multiple species (724e5b8)
  • bump py to 3.12 for mkdocs (87ef238)
  • change attribute from model_id to biomodel_id to avoid conflicts with langgraph internal namespaces (d2e16d8)
  • change file_id of dataverse (e2f9298)
  • change nested quotes (a89b741)
  • change torch version (9bf8730)
  • chnage pull_request_target to pull_request (87bfca1)
  • conflicts (881704f)
  • delete plot_figure tool (311f03d)
  • downgrade python (5d63e8b)
  • downgrade torch version (c5d49c5)
  • drop half precision option (b4c8eea)
  • drop the half precision (101913b)
  • execute a notebook (2bae5b3)
  • fix yaml file for T2B (bab1fff)
  • further downgrade pytorch (f9da9f4)
  • hotfix to add steady-state tool path to the init of T2B (588f63f)
  • implement DM requests (250830b)
  • make configs agent specific; update toml file (f65b0c8)
  • Merge pull request #48 from VirtualPatientEngine/fix/update-tests (266d34c)
  • Merge pull request #50 from VirtualPatientEngine/fix/update-README (6b8d70f)
  • mkdocs error and update streamlit app (a64c89c)
  • mkdocs-deploy yml (afcc0b8)
  • mkdocs-deploy yml (7d4aa6c)
  • modify coverage (ac06b05)
  • modify coverage over multi-os (9e15375)
  • modify project toml, docs and reqs (9eb4cfb)
  • modify project toml, docs and reqs (86c5cd0)
  • modify workflows (542b38d)
  • remove argument for negative sampling (4b2dd9b)
  • remove bash on workflows (632b625)
  • remove check-path workflows (68a434b)
  • reorganize repo (0ac4f5b)
  • reorganize the dataset loaders (319beca)
  • revert back python version (4255fb3)
  • separate ubuntu and macos code-cov (d4157ab)
  • switch to macos-13 for testing (97a9e0b)
  • the model description tool (ea795cb)
  • toml and req files (0c5995e)
  • update (15acbad)
  • update biobridge (d7e6eb9)
  • update custom_plotter test (746e10e)
  • update docs for talk2kg (87040a7)
  • update errors (830b2a2)
  • update errors (0af71f0)
  • update main pyproject.toml (5c1dec1)
  • update main README (b7345d8)
  • update mkdocs (0c3e70d)
  • update model_description (05821c0)
  • update notebook (b4a58e0)
  • update openai package (af1c8e4)
  • update pull_request event to pull_request_target for T2B (17adde2)
  • update python vesion in the README (efa896d)
  • update pytorch version (3d6593a)
  • update README (34597d5)
  • update release workflow to run only on change in main folder (24093dd)
  • update release.yml (ad7794c)
  • update requirements (fb65d89)
  • update requirements.txt (947ebef)
  • update status badge of tests (d9856f6)
  • update status badge of tests (d5de2b5)
  • update system prompt and mkdocs index page (ca7dbf9)
  • update test_custom_plotter (4655096)
  • update tests ([2f05ad1](2f05ad1...
Read more