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Understanding Biology Byte by Byte
Computational Bioscience PhD Candidate at University of Colorado Anschutz Medical Campus (CU-AMC) in the @WayScience Lab
- Denver, Colorado
- https://orcid.org/0000-0003-4188-9080
- @AxiomCura
Highlights
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CFReT-compound-prioritization-analysis
CFReT-compound-prioritization-analysis PublicForked from WayScience/CFReT-compound-prioritization-analysis
Jupyter Notebook
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CFReT-screen-mAP-analysis
CFReT-screen-mAP-analysis PublicForked from WayScience/CFReT-screen-mAP-analysis
Analysis notebooks applying mean average Precision (mAP) to the CFReT screen image-based profiles dataset.
Jupyter Notebook
310 contributions in the last year
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Contribution activity
March 2025
Created 2 commits in 1 repository
Created a pull request in WayScience/CFReT-screen-mAP-analysis that received 7 comments
Evaluating technical plate variance in CFReT targeted screen data using kBET
In this PR, we applied the kBET batch effect evaluation method to the CFReT targeted screen data. Given that the experiment was conducted in a sing…
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Opened 2 other pull requests in 1 repository
WayScience/CFReT-screen-mAP-analysis
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Added UMAP plot of compounds across four plates
This contribution was made on Mar 8
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Adding UMAP visualizations for control and treated profiles of the CFReT screen data
This contribution was made on Mar 6
Reviewed 3 pull requests in 2 repositories
WayScience/pyroptosis_signature_data_analysis
2 pull requests
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redo map without death labels
This contribution was made on Mar 12
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redo mAP and figure4
This contribution was made on Mar 11
WayScience/CFReT-screen-mAP-analysis
1 pull request
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Evaluating technical plate variance in CFReT targeted screen data using kBET
This contribution was made on Mar 12
4
contributions
in private repositories
Mar 18 – Mar 19