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multi-worm-tracker

Returns worm tracks from 3 fps monocolor behavioral recordings in .avi format and requires up to 50GB of free storage for a 2 h recording that will be deleted at the end of anaylsis.

See the multiwormtracker.ipynb for more details on implementation.

python_multi-worm-tracker_pitch_102323.pdf also contains more information on what this code is based on and a comparision to the exiting MATLAB tracker. Note: speed is off by a factor of 9 in the speed plot.

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A python script and notebook to extract worm tracks from .avi recordings and link worms across frames using a binary tree

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