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@bihealth

Berlin Institute of Health

BIH Core Unit Bioinformatics & BIH HPC IT

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  1. sodar-server sodar-server Public

    SODAR: System for Omics Data Access and Retrieval

    Python 16 3

  2. sodar-core sodar-core Public

    SODAR Core: A Django-based framework for building scientific data management web apps

    Python 9 1

  3. scelvis scelvis Public

    🎇 SCelVis - web-based visualization of single-cell data. ➡️ ➡️ Demo ➡️➡️

    Python 21 5

  4. digestiflow-server digestiflow-server Public

    🍸 Web-based database system for flow cell management (incl. REST API)

    Python 15 3

  5. altamisa altamisa Public

    AltamISA: a Python API for ISA-Tab files

    Python 5 2

Repositories

Showing 10 of 175 repositories
  • sodar-server Public

    SODAR: System for Omics Data Access and Retrieval

    bihealth/sodar-server’s past year of commit activity
    Python 16 MIT 3 344 (6 issues need help) 0 Updated Feb 18, 2025
  • cubi-tk Public

    CUBI Tooling for SODAR, VarFish et al.

    bihealth/cubi-tk’s past year of commit activity
    Python 5 MIT 5 41 5 Updated Feb 18, 2025
  • ood-bih-jupyter Public

    Open OnDemand App: Jupyter

    bihealth/ood-bih-jupyter’s past year of commit activity
    HTML 0 MIT 0 0 0 Updated Feb 18, 2025
  • sodar-core Public

    SODAR Core: A Django-based framework for building scientific data management web apps

    bihealth/sodar-core’s past year of commit activity
    Python 9 MIT 1 256 (2 issues need help) 0 Updated Feb 18, 2025
  • dotty Public

    cdot-based transcript projections

    bihealth/dotty’s past year of commit activity
    Python 0 MIT 0 2 0 Updated Feb 17, 2025
  • reev Public

    REEV: Explanation and Evaluation of Variants

    bihealth/reev’s past year of commit activity
    TypeScript 9 MIT 4 39 7 Updated Feb 17, 2025
  • seaPiper Public

    Workflow output explorer for sea-snap

    bihealth/seaPiper’s past year of commit activity
    R 0 GPL-3.0 0 5 0 Updated Feb 17, 2025
  • singularity-jupyter Public

    Singularity images for Jupyter (based on minconda3 Docker image)

    bihealth/singularity-jupyter’s past year of commit activity
    0 0 0 0 Updated Feb 17, 2025
  • sodar-cli Public

    SODAR REST API client (CLI + Python package)

    bihealth/sodar-cli’s past year of commit activity
    Python 1 MIT 1 8 4 Updated Feb 14, 2025
  • bih-cluster Public

    BIH Cluster Wiki

    bihealth/bih-cluster’s past year of commit activity
    Awk 16 36 6 (1 issue needs help) 0 Updated Feb 14, 2025
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