Code

Scanpy-pl#226

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Merged

slobentanzer merged 17 commits intobiohackathon3biocypher/biochatter:biohackathon3from scanpy-plbiocypher/biochatter:scanpy-plCopy head branch name to clipboardDec 11, 2024

+1,294-614

Commits

Commits on Dec 10, 2024

• add scanpy_pl module with initial fields

  slobentanzer

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• add mocked test for module

  slobentanzer

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• add module to API agent __init__.py

  slobentanzer

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• add benchmark case

  slobentanzer

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• add conditional for module benchmark

  slobentanzer

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• downgrade httpx due to conflict

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  slobentanzer

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• add back default question_uuid field into pydantic class

  slobentanzer

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• add scatter pydantic class

  slobentanzer

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Commits on Dec 11, 2024

• add sc.pl.pca

  daniele-lucarelli

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• add pca benchmark case

  daniele-lucarelli

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• distinguish web api and python api benchmark

  slobentanzer

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• change case to scatter

  slobentanzer

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• add tsne class

  daniele-lucarelli

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• add tsne case

  daniele-lucarelli

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• Merge branch 'scanpy-pl' of https://github.com/biocypher/biochatter into scanpy-pl

  daniele-lucarelli

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• fix typing

  daniele-lucarelli

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• add generic formatter (#233)

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  slobentanzer

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