fixed other bug in mutations empty file creation

bokulich-lab · Jul 10, 2024 · 86babac · 86babac
1 parent fa019d5
commit 86babac
Showing 1 changed file with 1 addition and 5 deletions.
diff --git a/q2_amr/amrfinderplus/mags.py b/q2_amr/amrfinderplus/mags.py
@@ -97,11 +97,7 @@ def annotate_sample_data_amrfinderplus(
                 shutil.move(mutations_path, des_dir_mutations)
             else:
                 with open(
-                    os.path.join(
-                        str(mutations),
-                        des_dir_mutations,
-                        os.path.basename(mutations_path),
-                    ),
+                    os.path.join(des_dir_mutations, os.path.basename(mutations_path)),
                     "w",
                 ):
                     pass