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commit after merge with branch remove_move_files
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VinzentRisch committed Jan 11, 2024
2 parents cc386b3 + 898241c commit c7102bf
Showing 1 changed file with 3 additions and 1 deletion.
4 changes: 3 additions & 1 deletion q2_amr/card/reads.py
Original file line number Diff line number Diff line change
Expand Up @@ -218,7 +218,9 @@ def extract_sample_stats(samp_dir: str):

def visualize_annotation_stats(
output_dir: str,
amr_reads_annotation: CARDAlleleAnnotationDirectoryFormat,
amr_reads_annotation: Union[
CARDGeneAnnotationDirectoryFormat, CARDAlleleAnnotationDirectoryFormat
],
):
directory = str(amr_reads_annotation)
sample_stats = {}
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