t2 random

broadinstitute · Mar 4, 2025 · 4dd4bfd · 4dd4bfd
1 parent 2fdb3a3
commit 4dd4bfd
Showing 1 changed file with 20 additions and 0 deletions.
diff --git a/ml4h/tensormap/ukb/mri_brain.py b/ml4h/tensormap/ukb/mri_brain.py
@@ -477,6 +477,16 @@ def random_mni_slice_tensor(tm, hd5, dependents={}):
     dependent_map=axial_index_map,
 )
 
+t1_mni_random_slice_32_160 = TensorMap(
+    't1_mni_random_slice',
+    Interpretation.CONTINUOUS,
+    shape=(192, 192, 1),
+    path_prefix='ukb_brain_mri/T1_brain_to_MNI/',
+    tensor_from_file=_random_slice_bounded(32, 160),
+    normalization=ZeroMeanStd1(),
+    dependent_map=axial_index_map,
+)
+
 t1_random_slice = TensorMap(
     't1_random_slice',
     Interpretation.CONTINUOUS,
@@ -507,6 +517,16 @@ def random_mni_slice_tensor(tm, hd5, dependents={}):
     dependent_map=axial_index_map,
 )
 
+t2_flair_random_slice_32_192 = TensorMap(
+    't2_flair_random_slice',
+    Interpretation.CONTINUOUS,
+    shape=(192, 256, 1),
+    path_prefix='ukb_brain_mri/T2_FLAIR_orig_defaced/',
+    tensor_from_file=_random_slice_bounded(32, 192),
+    normalization=ZeroMeanStd1(),
+    dependent_map=axial_index_map,
+)
+
 t2_flair_random_slice_127 = TensorMap(
     't2_flair_random_slice',
     Interpretation.CONTINUOUS,