Update pom.xml dependency versions

addons/storage/dependency-reduced-pom.xml

@@ -96,7 +96,7 @@
     <dependency>
       <groupId>junit</groupId>
       <artifactId>junit</artifactId>
-      <version>4.11</version>
+      <version>4.13.2</version>
       <scope>test</scope>
       <exclusions>
         <exclusion>

addons/storage/pom.xml

@@ -24,13 +24,13 @@
     <dependency>
       <groupId>junit</groupId>
       <artifactId>junit</artifactId>
-      <version>4.11</version>
+      <version>4.13.2</version>
       <scope>test</scope>
     </dependency>
     <dependency>
       <groupId>redis.clients</groupId>
       <artifactId>jedis</artifactId>
-      <version>4.3.0</version>
+      <version>5.0.2</version>
     </dependency>
     <dependency>
       <groupId>com.google.code.gson</groupId>
@@ -40,18 +40,18 @@
     <dependency>
       <groupId>io.grpc</groupId>
       <artifactId>grpc-netty-shaded</artifactId>
-      <version>1.56.0</version>
+      <version>1.59.0</version>
       <scope>runtime</scope>
     </dependency>
     <dependency>
       <groupId>io.grpc</groupId>
       <artifactId>grpc-protobuf</artifactId>
-      <version>1.56.0</version>
+      <version>1.59.0</version>
     </dependency>
     <dependency>
       <groupId>io.grpc</groupId>
       <artifactId>grpc-stub</artifactId>
-      <version>1.56.0</version>
+      <version>1.59.0</version>
     </dependency>
     <dependency> <!-- necessary for Java 9+ -->
       <groupId>org.apache.tomcat</groupId>

src/dataclay/annotated.py

@@ -1,6 +1,6 @@
 class PropertyTransformer:
     """Parent class for annotations that transform object attributes.
-    
+
     This class is not intended to be used by itself, but instead inherited and
     implemented. Right now, this class is a trivial implementation, i.e.
     passthrough of getter and setter.
@@ -23,10 +23,11 @@ def setter(self, value):
 
 class LocalOnly:
     """Annotation to specify attributes that must no be persisted.
-    
+
     Example::
 
         class ComplexAlgorithm(DataClayObject):
             primes_cache: Annotated[list[int], LocalOnly]
     """
+
     pass

src/dataclay/contrib/mqtt.py

@@ -16,7 +16,7 @@ class MQTTMixin:
     """MQTT mechanisms"""
 
     @activemethod
-    def produce_mqtt_msg(self, data: dict[str, Any], topic: str="dataclay"):
+    def produce_mqtt_msg(self, data: dict[str, Any], topic: str = "dataclay"):
         import os
         from json import dumps
 

src/dataclay/contrib/nvm.py

@@ -15,10 +15,16 @@
     import npp2nvm
 except ImportError:
     import warnings
-    warnings.warn("npp2nvm package is not installed. InNVM annotation will fail. Install npp2nvm package.")
+
+    warnings.warn(
+        "npp2nvm package is not installed. InNVM annotation will fail. Install npp2nvm package."
+    )
 except KeyError:
     import warnings
-    warnings.warn("npp2nvm had a configuration error. InNVM annotation will fail. Check npp2nvm documentation.")
+
+    warnings.warn(
+        "npp2nvm had a configuration error. InNVM annotation will fail. Check npp2nvm documentation."
+    )
 
 
 class InNVM(PropertyTransformer):
@@ -38,5 +44,6 @@ class Experiment(DataClayObject):
         >>> e.make_persistent()
         >>> e.observations = np.array([1,2,3])
     """
+
     def setter(self, value):
         return npp2nvm.np_persist(value)

src/storage/api.py

@@ -28,7 +28,7 @@
 
 def get_client() -> Client:
     """Get the global (singleton) Client instance.
-    
+
     This can be run in the worker nodes (i.e., inside a task). Given the
     regular initialization flow of the worker (i.e., after it calls initWorker)
     a global Client instane is available and can be used.