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Your workflow is using a version of actions/cache that is scheduled for deprecation, actions/cache@v2. Please update your workflow to use the latest version of actions/cache to avoid interruptions. Learn more: https://github.blog/changelog/2024-09-16-notice-of-upcoming-deprecations-and-changes-in-github-actions-services/

Your workflow is using a version of actions/cache that is scheduled for deprecation, actions/cache@v2. Please update your workflow to use the latest version of actions/cache to avoid interruptions. Learn more: https://github.blog/changelog/2024-09-16-notice-of-upcoming-deprecations-and-changes-in-github-actions-services/

The following actions uses node12 which is deprecated and will be forced to run on node16: r-lib/actions/setup-pandoc@v1, actions/cache@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/

The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3, r-lib/actions/setup-pandoc@v1, actions/cache@v2. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/

/private/var/folders/g6/rgtlsw6n123b0gt5483s5_cm0000gn/T/RtmpshzZSQ/Rbuild43b34ff732a6/CNAqc/man/plot_SBS.Rd:14: unexpected section header '\value'

/private/var/folders/g6/rgtlsw6n123b0gt5483s5_cm0000gn/T/RtmpshzZSQ/Rbuild43b34ff732a6/CNAqc/man/plot_SBS.Rd:17: unexpected section header '\description'

/private/var/folders/g6/rgtlsw6n123b0gt5483s5_cm0000gn/T/RtmpshzZSQ/Rbuild43b34ff732a6/CNAqc/man/plot_SBS.Rd:24: unexpected section header '\examples'

/private/var/folders/g6/rgtlsw6n123b0gt5483s5_cm0000gn/T/RtmpshzZSQ/Rbuild43b34ff732a6/CNAqc/man/plot_SBS.Rd:33: unexpected END_OF_INPUT '

No files were found with the provided path: check. No artifacts will be uploaded.

replacing previous import ‘cli::num_ansi_colors’ by ‘crayon::num_ansi_colors’ when loading ‘easypar’

replacing previous import ‘cli::num_ansi_colors’ by ‘crayon::num_ansi_colors’ when loading ‘easypar’

replacing previous import ‘cli::num_ansi_colors’ by ‘crayon::num_ansi_colors’ when loading ‘easypar’

replacing previous import ‘cli::num_ansi_colors’ by ‘crayon::num_ansi_colors’ when loading ‘BMix’

replacing previous import ‘crayon::%+%’ by ‘ggplot2::%+%’ when loading ‘BMix’

replacing previous import ‘cli::num_ansi_colors’ by ‘crayon::num_ansi_colors’ when loading ‘BMix’

replacing previous import ‘crayon::%+%’ by ‘ggplot2::%+%’ when loading ‘BMix’

replacing previous import ‘cli::num_ansi_colors’ by ‘crayon::num_ansi_colors’ when loading ‘BMix’

replacing previous import ‘crayon::%+%’ by ‘ggplot2::%+%’ when loading ‘BMix’

unable to access index for repository https://bioconductor.org/packages/3.18/bioc/bin/macosx/big-sur-arm64/contrib/4.4:

r-lib/actions/setup-pandoc@v1 is deprecated. Please update your workflow to use the 'v2' version.

The following actions uses node12 which is deprecated and will be forced to run on node16: r-lib/actions/setup-pandoc@v1. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/

The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3, r-lib/actions/setup-pandoc@v1. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/

replacing previous import 'cli::num_ansi_colors' by 'crayon::num_ansi_colors' when loading 'easypar'

replacing previous import 'cli::num_ansi_colors' by 'crayon::num_ansi_colors' when loading 'easypar'

replacing previous import 'cli::num_ansi_colors' by 'crayon::num_ansi_colors' when loading 'easypar'

replacing previous import 'cli::num_ansi_colors' by 'crayon::num_ansi_colors' when loading 'BMix'

replacing previous import 'crayon::%+%' by 'ggplot2::%+%' when loading 'BMix'

replacing previous import 'cli::num_ansi_colors' by 'crayon::num_ansi_colors' when loading 'BMix'

replacing previous import 'crayon::%+%' by 'ggplot2::%+%' when loading 'BMix'

replacing previous import 'cli::num_ansi_colors' by 'crayon::num_ansi_colors' when loading 'BMix'

replacing previous import 'crayon::%+%' by 'ggplot2::%+%' when loading 'BMix'

unable to access index for repository https://bioconductor.org/packages/3.18/bioc/bin/windows/contrib/4.4:

No files were found with the provided path: check. No artifacts will be uploaded.

C:/Users/runneradmin/AppData/Local/Temp/RtmpYd1j0X/Rbuild718204d684e/CNAqc/man/plot_SBS.Rd:14: unexpected section header '\value'

C:/Users/runneradmin/AppData/Local/Temp/RtmpYd1j0X/Rbuild718204d684e/CNAqc/man/plot_SBS.Rd:17: unexpected section header '\description'

C:/Users/runneradmin/AppData/Local/Temp/RtmpYd1j0X/Rbuild718204d684e/CNAqc/man/plot_SBS.Rd:24: unexpected section header '\examples'

C:/Users/runneradmin/AppData/Local/Temp/RtmpYd1j0X/Rbuild718204d684e/CNAqc/man/plot_SBS.Rd:33: unexpected END_OF_INPUT '

r-lib/actions/setup-pandoc@v1 is deprecated. Please update your workflow to use the 'v2' version.