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Add RNA-Seq MWFR for SMaHT #178

Add RNA-Seq MWFR for SMaHT

Add RNA-Seq MWFR for SMaHT #178

Workflow file for this run

# granite GA Workflow
name: CI
# Controls when the action will run.
on:
# Triggers the workflow on push or pull request events but only for the master branch
push:
branches: [ master ]
pull_request:
branches: [ master ]
# Allows you to run this workflow manually from the Actions tab
workflow_dispatch:
# A workflow run is made up of one or more jobs that can run sequentially or in parallel
jobs:
# This workflow contains a single job called "test"
test:
name: Test magma with Python ${{ matrix.python_version }}
# The type of runner that the job will run on
runs-on: ubuntu-22.04
strategy:
matrix:
python_version: ['3.8', '3.9', '3.10', '3.11', '3.12']
# Steps represent a sequence of tasks that will be executed as part of the job
steps:
# Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it
- uses: actions/checkout@v2
- uses: actions/setup-python@v2
with:
python-version: ${{ matrix.python_version }}
- name: Test magma
env:
AWS_ACCESS_KEY_ID: AWSACCESSKEYID
AWS_SECRET_ACCESS_KEY: AWSSECRETACCESSKEY
AWS_DEFAULT_REGION: eu-east-1
AWS_DEFAULT_OUTPUT: json
AWS_ACCOUNT_NUMBER: 123456789011
TIBANNA_AWS_REGION: us-east-1
GLOBAL_ENV_BUCKET: something
run: |
make configure
make build
make test