Add BAM to CRAM conversion workflow support #45
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Introduces BAM to CRAM conversion MetaWorkflowRun, including CLI command, workflow logic, and utility functions to check for existing conversions and retrieve final output files. Updates constants for new workflow and assay types, and extends sample identity check to include CRAM files.
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Introduces BAM to CRAM conversion MetaWorkflowRun, including CLI command, workflow logic, and utility functions to check for existing conversions and retrieve final output files. Updates constants for new workflow and assay types, and extends sample identity check to include CRAM files.