Search results

Run primex alone - input format

Status: Open.

#98 In dieterich-lab/circtools;

· Zgautier opened on Jan 23, 2026

remapping input should be Unmapped.out.mate or mate of PE?

Status: Open.

#92 In dieterich-lab/circtools;

· genebial opened on Nov 28, 2021

linear primers in circtools primex for each circRNA candidate

enhancement

primer

Status: Open.

#84 In dieterich-lab/circtools;

· daaaaande opened on Oct 2, 2019

·  

Version 1.2.0.0

Python2 and 3 support not feasible on HPC environments

Status: Open.

#82 In dieterich-lab/circtools;

· Psy-Fer opened on Aug 22, 2019

Different results for circtest from circtools or from R

bug

Status: Open.

#69 In dieterich-lab/circtools;

· idotu opened on Nov 13, 2018

Add per exon p-value and log2 fold changes to exon Excel output

enhancement

reconstruct

Status: Open.

#48 In dieterich-lab/circtools;

· tjakobi opened on Dec 14, 2017

·  

Version 1.2.0.0

Investigate what 'unknown breakpoint' events are

question

reconstruct

Status: Open.

#42 In dieterich-lab/circtools;

· tjakobi opened on Nov 2, 2017

·  

Version 1.2.0.0

Normalize #circRNA isoforms in visualization plots

enhancement

enrich

Status: Open.

#41 In dieterich-lab/circtools;

· tjakobi opened on Nov 2, 2017

·  

Version 1.2.0.0

Module to analyse conservation of circRNAs across species

feature

Status: Open.

#36 In dieterich-lab/circtools;

· tjakobi opened on Aug 31, 2017

·  

Version 1.2.0.0

Module to design siRNAs

enhancement

feature

Status: Open.

#24 In dieterich-lab/circtools;

· tjakobi opened on Jun 30, 2017

·  

Version 1.2.0.0

Remove (py)bedtools dependency

enhancement

Status: Open.

#16 In dieterich-lab/circtools;

· tjakobi opened on Jun 18, 2017

·  

Version 1.2.0.0

Add support for zipped input files

enhancement

Status: Open.

#15 In dieterich-lab/circtools;

· tjakobi opened on Jun 17, 2017

·  

Version 1.2.0.0