update database structure

digital-botanical-gardens-initiative · Jun 14, 2024 · e60a7a5 · e60a7a5
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diff --git a/vault/master-work-23-24.Database.Aliquots.md b/vault/master-work-23-24.Database.Aliquots.md
diff --git a/vault/master-work-23-24.Database.Batch.md b/vault/master-work-23-24.Database.Batch.md
diff --git a/vault/master-work-23-24.Database.Emi_codes.md b/vault/master-work-23-24.Database.Emi_codes.md
diff --git a/vault/master-work-23-24.Database.Extraction_methods.md b/vault/master-work-23-24.Database.Extraction_methods.md
diff --git a/vault/master-work-23-24.Database.Field_samples.md b/vault/master-work-23-24.Database.Field_samples.md
diff --git a/vault/master-work-23-24.Database.Inat_data.md b/vault/master-work-23-24.Database.Inat_data.md
diff --git a/vault/master-work-23-24.Database.Inaturalist_Commented_Observations.md b/vault/master-work-23-24.Database.Inaturalist_Commented_Observations.md
diff --git a/vault/master-work-23-24.Database.Injection_Methods.md b/vault/master-work-23-24.Database.Injection_Methods.md
diff --git a/vault/master-work-23-24.Database.Lab_extracts.md b/vault/master-work-23-24.Database.Lab_extracts.md
diff --git a/vault/master-work-23-24.Database.Labels.md b/vault/master-work-23-24.Database.Labels.md
diff --git a/vault/master-work-23-24.Database.Mass_spectrometers.md b/vault/master-work-23-24.Database.Mass_spectrometers.md
diff --git a/vault/master-work-23-24.Database.Mass_spectrometry_analysis.md b/vault/master-work-23-24.Database.Mass_spectrometry_analysis.md
diff --git a/vault/master-work-23-24.Database.Mobile_containers.md b/vault/master-work-23-24.Database.Mobile_containers.md
diff --git a/vault/master-work-23-24.Database.QField_data.md b/vault/master-work-23-24.Database.QField_data.md
diff --git a/vault/master-work-23-24.Database.QField_data_obs.md b/vault/master-work-23-24.Database.QField_data_obs.md
diff --git a/vault/master-work-23-24.Database.SI_units.md b/vault/master-work-23-24.Database.SI_units.md
diff --git a/vault/master-work-23-24.Database.Static_containers.md b/vault/master-work-23-24.Database.Static_containers.md
diff --git a/vault/master-work-23-24.Database.Universities.md b/vault/master-work-23-24.Database.Universities.md
diff --git a/vault/master-work-23-24.Database.md b/vault/master-work-23-24.Database.md
@@ -2,7 +2,7 @@
 id: utxt2dpc9ytwb941oz4nfg8
 title: Database
 desc: ''
-updated: 1718356810828
+updated: 1718357017633
 created: 1718349400476
 ---
 
@@ -15,24 +15,24 @@ This database is the core part that stores the data from the beginning to the en
 ## Data structure
 
 The data structure works as follow:
-- [[master-work-23-24.Database.Emi_codes]]: A table that stores all EMI projects informations. It permits to organize all these projects in the database and different services.
-- [[master-work-23-24.Database.Universities]]:
-- [[master-work-23-24.Database.Labels]]: A table that stores all the sample labels we generate using the [[master-work-23-24.Scripts.Python.label-creator]] software. This permits to only obtain unique labels to avoid duplicate samples for each project.
-- [[master-work-23-24.Database.Mobile_containers]]:
-- [[master-work-23-24.Database.Static_containers]]:
-- [[master-work-23-24.Database.QField_data]]: A table that stores the collection metadata. This also permit to check that samples labels used during the collection are effectively unique and present in the [[master-work-23-24.Database.Labels]] table.
-- [[master-work-23-24.Database.QField_data_obs]]: A table that store the observations metadata from specimens we cuouldn't collect during collection campains.
-- [[master-work-23-24.Database.Inat_data]]: A table that stores the [[master-work-23-24.iNaturalist]] metadata. These data are fetched from [[master-work-23-24.iNaturalist]], in order to have a community taxon resolution or curation, retrieved by the [[master-work-23-24.Scripts.Python.inat-fetcher]] script.
-- [[master-work-23-24.Database.Inaturalist_Commented_Observations]]:
-- [[master-work-23-24.Database.Field_samples]]: A table that stores the field samples metadata. It makes the link between collection and iNaturalist metadata and the laboratory metadata.
-- [[master-work-23-24.Database.Batch]]:
-- [[master-work-23-24.Database.Extraction_methods]]:
-- [[master-work-23-24.Database.Lab_extracts]]:
-- [[master-work-23-24.Database.Aliquots]]:
-- [[master-work-23-24.Database.Injection_Methods]]:
-- [[master-work-23-24.Database.Mass_spectrometers]]:
-- [[master-work-23-24.Database.Mass_spectrometry_analysis]]:
-- [[master-work-23-24.Database.SI_units]]:
+- [[master-work-23-24.Database.tables.Emi_codes]]: A table that stores all EMI projects informations. It permits to organize all these projects in the database and different services.
+- [[master-work-23-24.Database.tables.Universities]]:
+- [[master-work-23-24.Database.tables.Labels]]: A table that stores all the sample labels we generate using the [[master-work-23-24.Scripts.Python.label-creator]] software. This permits to only obtain unique labels to avoid duplicate samples for each project.
+- [[master-work-23-24.Database.tables.Mobile_containers]]:
+- [[master-work-23-24.Database.tables.Static_containers]]:
+- [[master-work-23-24.Database.tables.QField_data]]: A table that stores the collection metadata. This also permit to check that samples labels used during the collection are effectively unique and present in the [[master-work-23-24.Database.tables.Labels]] table.
+- [[master-work-23-24.Database.tables.QField_data_obs]]: A table that store the observations metadata from specimens we cuouldn't collect during collection campains.
+- [[master-work-23-24.Database.tables.Inat_data]]: A table that stores the [[master-work-23-24.iNaturalist]] metadata. These data are fetched from [[master-work-23-24.iNaturalist]], in order to have a community taxon resolution or curation, retrieved by the [[master-work-23-24.Scripts.Python.inat-fetcher]] script.
+- [[master-work-23-24.Database.tables.Inaturalist_Commented_Observations]]:
+- [[master-work-23-24.Database.tables.Field_samples]]: A table that stores the field samples metadata. It makes the link between collection and iNaturalist metadata and the laboratory metadata.
+- [[master-work-23-24.Database.tables.Batch]]:
+- [[master-work-23-24.Database.tables.Extraction_methods]]:
+- [[master-work-23-24.Database.tables.Lab_extracts]]:
+- [[master-work-23-24.Database.tables.Aliquots]]:
+- [[master-work-23-24.Database.tables.Injection_Methods]]:
+- [[master-work-23-24.Database.tables.Mass_spectrometers]]:
+- [[master-work-23-24.Database.tables.Mass_spectrometry_analysis]]:
+- [[master-work-23-24.Database.tables.SI_units]]:
 
 
 
diff --git a/vault/master-work-23-24.Database.tables.Aliquots.md b/vault/master-work-23-24.Database.tables.Aliquots.md
@@ -0,0 +1,7 @@
+---
+id: o8f2vmukrdc0uaiyelj97cp
+title: Aliquots
+desc: ''
+updated: 1718357178048
+created: 1718357178048
+---
diff --git a/vault/master-work-23-24.Database.tables.Batch.md b/vault/master-work-23-24.Database.tables.Batch.md
@@ -0,0 +1,7 @@
+---
+id: ugsezhu2rgxy4toabfnxgcy
+title: Batch
+desc: ''
+updated: 1718357164316
+created: 1718357164316
+---
diff --git a/vault/master-work-23-24.Database.tables.Emi_codes.md b/vault/master-work-23-24.Database.tables.Emi_codes.md
@@ -0,0 +1,7 @@
+---
+id: cr8b57krpp7sf975jhadggn
+title: Emi_codes
+desc: ''
+updated: 1718357119388
+created: 1718357119388
+---
diff --git a/vault/master-work-23-24.Database.tables.Extraction_methods.md b/vault/master-work-23-24.Database.tables.Extraction_methods.md
@@ -0,0 +1,7 @@
+---
+id: rkuq1mu7hxhjjsft1qtd4j0
+title: Extraction_methods
+desc: ''
+updated: 1718357170173
+created: 1718357170174
+---
diff --git a/vault/master-work-23-24.Database.tables.Field_samples.md b/vault/master-work-23-24.Database.tables.Field_samples.md
@@ -0,0 +1,7 @@
+---
+id: rxcgo7dn9xx74dc34srva71
+title: Field_samples
+desc: ''
+updated: 1718357159713
+created: 1718357159713
+---
diff --git a/vault/master-work-23-24.Database.tables.Inat_data.md b/vault/master-work-23-24.Database.tables.Inat_data.md
@@ -0,0 +1,7 @@
+---
+id: d1xe88if92vq1m9bbz2og9p
+title: Inat_data
+desc: ''
+updated: 1718357147542
+created: 1718357147542
+---
diff --git a/vault/master-work-23-24.Database.tables.Inaturalist_Commented_Observations.md b/vault/master-work-23-24.Database.tables.Inaturalist_Commented_Observations.md
@@ -0,0 +1,7 @@
+---
+id: abvbz82u5e6yus8syfsyd4l
+title: Inaturalist_Commented_Observations
+desc: ''
+updated: 1718357152027
+created: 1718357152027
+---
diff --git a/vault/master-work-23-24.Database.tables.Injection_Methods.md b/vault/master-work-23-24.Database.tables.Injection_Methods.md
@@ -0,0 +1,7 @@
+---
+id: 7auwg8a7mv2af86s2t92sft
+title: Injection_Methods
+desc: ''
+updated: 1718357182565
+created: 1718357182565
+---
diff --git a/vault/master-work-23-24.Database.tables.Lab_extracts.md b/vault/master-work-23-24.Database.tables.Lab_extracts.md
@@ -0,0 +1,7 @@
+---
+id: yle3aqaw7mwrqpllby6da8t
+title: Lab_extracts
+desc: ''
+updated: 1718357174268
+created: 1718357174268
+---
diff --git a/vault/master-work-23-24.Database.tables.Labels.md b/vault/master-work-23-24.Database.tables.Labels.md
@@ -0,0 +1,7 @@
+---
+id: by5k5tb9lwwo7yifwyifp4h
+title: Labels
+desc: ''
+updated: 1718357127869
+created: 1718357127869
+---
diff --git a/vault/master-work-23-24.Database.tables.Mass_spectrometers.md b/vault/master-work-23-24.Database.tables.Mass_spectrometers.md
@@ -0,0 +1,7 @@
+---
+id: l1ieayyu7s786br7fdkkto7
+title: Mass_spectrometers
+desc: ''
+updated: 1718357186096
+created: 1718357186097
+---
diff --git a/vault/master-work-23-24.Database.tables.Mass_spectrometry_analysis.md b/vault/master-work-23-24.Database.tables.Mass_spectrometry_analysis.md
@@ -0,0 +1,7 @@
+---
+id: y3c6n1ixvqec7sy7hh6t15r
+title: Mass_spectrometry_analysis
+desc: ''
+updated: 1718357189191
+created: 1718357189191
+---
diff --git a/vault/master-work-23-24.Database.tables.Mobile_containers.md b/vault/master-work-23-24.Database.tables.Mobile_containers.md
@@ -0,0 +1,7 @@
+---
+id: 9fmgn0zbmlto0n55la7jrym
+title: Mobile_containers
+desc: ''
+updated: 1718357132281
+created: 1718357132281
+---
diff --git a/vault/master-work-23-24.Database.tables.QField_data.md b/vault/master-work-23-24.Database.tables.QField_data.md
@@ -0,0 +1,7 @@
+---
+id: e5cca4cwtfd9dom3fr2wymc
+title: QField_data
+desc: ''
+updated: 1718357140452
+created: 1718357140452
+---
diff --git a/vault/master-work-23-24.Database.tables.QField_data_obs.md b/vault/master-work-23-24.Database.tables.QField_data_obs.md
@@ -0,0 +1,7 @@
+---
+id: jk284jsbp1e9egaqyaujlih
+title: QField_data_obs
+desc: ''
+updated: 1718357143775
+created: 1718357143775
+---
diff --git a/vault/master-work-23-24.Database.tables.SI_units.md b/vault/master-work-23-24.Database.tables.SI_units.md
@@ -0,0 +1,7 @@
+---
+id: 9krrrl9178bol25kwfmb21w
+title: SI_units
+desc: ''
+updated: 1718357192509
+created: 1718357192509
+---
diff --git a/vault/master-work-23-24.Database.tables.Static_containers.md b/vault/master-work-23-24.Database.tables.Static_containers.md
@@ -0,0 +1,7 @@
+---
+id: ro2zodpssvdr2srsufpm3cp
+title: Static_containers
+desc: ''
+updated: 1718357135863
+created: 1718357135863
+---
diff --git a/vault/master-work-23-24.Database.tables.Universities.md b/vault/master-work-23-24.Database.tables.Universities.md
@@ -0,0 +1,7 @@
+---
+id: otxg0su3j2ef4sr9z2cbr3i
+title: Universities
+desc: ''
+updated: 1718357123916
+created: 1718357123916
+---