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EMO BON

EMBRC Marine Omics Biodiversity Observation Network

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  1. MetaGOflow MetaGOflow Public

    Forked from EBI-Metagenomics/pipeline-v5

    MGnify oriented implementation for the Marine Genomic Observatories oriented pipeline, developed in the framework of an EOSC-Life funded project

    Python 9 8

  2. hackathon2022 hackathon2022 Public

    Tutorials and further material for the "Learning Data Management and Workflow Analyses: a hackathon from the EMBRC’s EMO BON (marine metagenomics) project" hackathon

    Common Workflow Language

  3. governance-crate governance-crate Public

    Holds the governance content for the emo-bon data management

  4. sequencing-crate sequencing-crate Public

    The files controlling and describing the sequencing metadata

    2

  5. emobon-dm-tools emobon-dm-tools Public

    Collection of scripts and tricks that help automate collecting / formatting / checking the data from the observatories

    Python

  6. emo-bon.github.io emo-bon.github.io Public

    For the data landing page

Repositories

Showing 10 of 48 repositories
  • dump-dset-catalogue-docker Public

    dockerised executor of the sema.harvest process to extract dataset metadata published at data.emobon.embrc.eu

    emo-bon/dump-dset-catalogue-docker’s past year of commit activity
    0 MIT 0 2 0 Updated Feb 6, 2025
  • analysis-results-uplifting-docker Public

    dockerised executor of the sema.subyt uplifting for the analysis results

    emo-bon/analysis-results-uplifting-docker’s past year of commit activity
    Makefile 0 MIT 0 3 1 Updated Feb 6, 2025
  • observatory-bpns-crate Public

    EMO BON observatory - logsheets

    emo-bon/observatory-bpns-crate’s past year of commit activity
    Roff 0 0 9 0 Updated Feb 6, 2025
  • data-management-book Public

    repository that contains all documentation relating to data management of emo-bon project

    emo-bon/data-management-book’s past year of commit activity
    CSS 0 Apache-2.0 0 2 0 Updated Feb 6, 2025
  • emo-bon.github.io Public

    For the data landing page

    emo-bon/emo-bon.github.io’s past year of commit activity
    0 0 15 (1 issue needs help) 0 Updated Feb 6, 2025
  • repo-constructor-action Public

    Action to construct repos for EMO BON observatories

    emo-bon/repo-constructor-action’s past year of commit activity
    Python 0 0 0 0 Updated Feb 5, 2025
  • observatory-profile Public

    Repository for the templates and additional metadata, that are used to semantically uplift emo-bon logsheet data into triples

    emo-bon/observatory-profile’s past year of commit activity
    Jinja 0 1 29 0 Updated Jan 30, 2025
  • rocrate-metadata-generator-action Public

    Action to create ro-crate json files for each EMO BON observatory repo

    emo-bon/rocrate-metadata-generator-action’s past year of commit activity
    Python 0 0 6 0 Updated Jan 30, 2025
  • governance-crate Public

    Holds the governance content for the emo-bon data management

    emo-bon/governance-crate’s past year of commit activity
    0 0 14 (1 issue needs help) 0 Updated Jan 30, 2025
  • metagoflow-data-products-ro-crate Public

    Code to create RO-Crates for MetaGOflow workflow outputs

    emo-bon/metagoflow-data-products-ro-crate’s past year of commit activity
    Python 0 CC-BY-4.0 0 5 0 Updated Jan 29, 2025
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