Rosalind's Challenge - Bioinformatics challenge (2018)
There are 9 python scripts :
- Binary_search : a script that performs a binary search on a list.
- Consensus_and_profil : a script which establish a consensus sequence from a multiple sequence fasta file.
- Traduction : performs the translation (in biology : RNA to Protein).
- Finding_motif_in_dna : Finds a given motif on a given DNA sequence.
- Motif_search : Finds a given motif on a given DNA sequence (multiple methods)
- n_uplets : Mathematical problem, finds all triplets in arithmetic progression for a given tuple
- random_motif : generates a random motif from a list of nucleotides (A, T, G, C)
- get_motif : get all motifs (PROSITE) from a multiple alignment file
- genomique comparative scripts : scripts to get a fasta seq, its id, dscription, all organismes from a database of homologous proteins, motif from multiple alignment file
You can find my Rosalind account here : http://rosalind.info/users/glageosa/