Add EtR featurizer for training and switch default warper to original.

PiperOrigin-RevId: 693477935

optformer/embed_then_regress/normalization.py

@@ -234,8 +234,18 @@ def unwarp(self, ys: jt.Float[np.ndarray, 'L']) -> jt.Float[np.ndarray, 'L']:
 
 
 def default_warper() -> StatefulWarper:
+  """Warper used in original paper."""
   return SequentialWarper([
       HalfRankWarper(),
-      LinearScalingWarper(),
-      SigmoidDampenWarper(),
+      LinearScalingWarper(scale=0.5),
+      SigmoidDampenWarper(curvature=1.0, scale=1.0),
+  ])
+
+
+def new_warper() -> StatefulWarper:
+  """New warper which may be more stable."""
+  return SequentialWarper([
+      HalfRankWarper(),
+      LinearScalingWarper(scale=1.0),
+      SigmoidDampenWarper(curvature=0.5, scale=1.0),
   ])

optformer/embed_then_regress/vizier/featurizer.py

@@ -0,0 +1,124 @@
+# Copyright 2024 Google LLC.
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#     http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+
+"""Featurizer for Vizier; used for training only."""
+
+import functools
+from typing import Sequence
+
+import attrs
+import numpy as np
+from optformer.common.data import featurizers
+from optformer.common.data import filters
+from optformer.embed_then_regress import normalization
+from optformer.embed_then_regress.vizier import serializers
+from optformer.vizier.data import augmenters
+import tensorflow.google.compat.v2 as tf
+from vizier import pyvizier as vz
+
+
+VizierFilter = filters.Filter[vz.ProblemAndTrials]
+
+
+@attrs.define(init=True, kw_only=True)
+class ICLFeaturizer(featurizers.Featurizer[vz.ProblemAndTrials]):
+  """Converts a Vizier study to strings suitable for ICL training."""
+
+  min_context: int = attrs.field(default=5)  # 5
+  max_context: int = attrs.field(default=100)
+  max_trials: int = attrs.field(default=120)
+
+  warper: normalization.StatefulWarper = attrs.field(
+      factory=normalization.default_warper
+  )
+
+  _prefilters: Sequence[VizierFilter] = attrs.field(factory=list)
+  _augmenters: Sequence[augmenters.VizierAugmenter] = attrs.field(factory=list)
+  _postfilters: Sequence[VizierFilter] = attrs.field(factory=list)
+
+  @functools.cached_property
+  def element_spec(self) -> dict[str, tf.TensorSpec]:
+    return {
+        'x': tf.TensorSpec(shape=(None,), dtype=tf.string),  # L
+        'y': tf.TensorSpec(shape=(None,), dtype=tf.float32),  # L
+        'metadata': tf.TensorSpec(shape=(), dtype=tf.string),  # Scalar
+        'mask': tf.TensorSpec(shape=(None,), dtype=tf.bool),  # L
+    }
+
+  @functools.cached_property
+  def empty_output(self) -> dict[str, tf.Tensor]:
+    return {
+        'x': tf.constant([''], dtype=tf.string),
+        'y': tf.constant([0.0], dtype=tf.float32),
+        'metadata': tf.constant('', dtype=tf.string),
+        'mask': tf.constant([False], dtype=tf.bool),
+    }
+
+  def to_features(self, study: vz.ProblemAndTrials, /) -> dict[str, tf.Tensor]:
+    # pylint:disable=invalid-name
+    for study_filter in self._prefilters:
+      if not study_filter(study):
+        raise ValueError(f'{study_filter} rejected study.')
+
+    for study_augmenter in self._augmenters:
+      # NOTE: Study may be modified in-place rather than copied.
+      study = study_augmenter.augment_study(study)
+
+    for study_filter in self._postfilters:
+      if not study_filter(study):
+        raise ValueError(f'{study_filter} rejected study.')
+
+    if not study.trials:
+      raise ValueError('Study has no trials.')
+
+    # Limit maximum sequence length.
+    study.trials[:] = study.trials[: self.max_trials]
+
+    metadata = serializers.SearchSpaceSerializer().to_str(
+        study.problem.search_space
+    )
+    m_name = study.problem.metric_information.item().name
+    L = len(study.trials)
+
+    xs = []
+    ys = []
+    x_serializer = serializers.XSerializer(study.problem.search_space)
+    for trial in study.trials:
+      xs.append(x_serializer.to_str(trial))
+      ys.append(trial.final_measurement_or_die.metrics[m_name].value)
+
+    num_context = np.random.randint(self.min_context, self.max_context)
+
+    # Edit masking.
+    mask = np.ones(L, dtype=bool)
+    # Apply random permutation.
+    perm = np.random.permutation(L)
+    xs = [xs[i] for i in perm]
+    ys = [ys[i] for i in perm]
+    mask[num_context:] = False
+
+    # Warp y-values.
+    ys = np.array(ys)
+    self.warper.train(ys[:num_context])
+    ys = self.warper.warp(ys)
+
+    if np.isnan(ys).any():
+      raise ValueError(f'Y values contain NaN: {ys}')
+
+    return {
+        'x': tf.constant(xs, dtype=tf.string),
+        'y': tf.constant(ys, dtype=tf.float32),
+        'metadata': tf.constant(metadata, dtype=tf.string),
+        'mask': tf.constant(mask, dtype=tf.bool),
+    }

optformer/embed_then_regress/vizier/serializers.py

@@ -34,18 +34,26 @@ class XSerializer(SuggestionSerializer):
       factory=s_lib.PrimitiveSerializer, kw_only=True
   )
 
+  # Use decimal or scientific notation for numeric param values.
+  # Decimal works best only if search space is standardized.
+  use_scientific: bool = attrs.field(default=False, kw_only=True)
+
   def to_str(self, t: vz.TrialSuggestion, /) -> str:
     param_dict = t.parameters.as_dict()
 
     new_param_dict = dict()
     for pc in self.search_space.parameters:
       value = param_dict[pc.name]
       if isinstance(value, (float, int)):
-        new_param_dict[pc.name] = format(value, '.2e')  # Scientific notation.
+        float_format = '.2e' if self.use_scientific else '.2f'
+        new_param_dict[pc.name] = format(value, float_format)
       else:
         new_param_dict[pc.name] = value
 
     metadata_str = vs_lib.MetadataSerializer().to_str(t.metadata)
     return self.primitive_serializer.to_str(
         {'params': new_param_dict, 'metadata': metadata_str}
     )
+
+
+SearchSpaceSerializer = vs_lib.SearchSpaceSerializer

optformer/vizier/data/augmenters_test.py

@@ -29,10 +29,11 @@ def test_e2e(self):
     ss = vz.SearchSpace()
     ss.add(vz.ParameterConfig.factory('A', bounds=(0, 1)))
     ss.add(vz.ParameterConfig.factory('B', bounds=(0, 1)))
-    ss.add(vz.ParameterConfig.factory('C', bounds=(0, 1)))
+    ss.add(vz.ParameterConfig.factory('C', feasible_values=['c1', 'c2', 'c3']))
 
     new_ss = augmenters.SearchSpacePermuter(seed=0).augment(ss)
     self.assertEqual([p.name for p in new_ss.parameters], ['A', 'C', 'B'])
+    self.assertEqual(new_ss.parameters[1].feasible_values, ['c3', 'c2', 'c1'])
 
 
 class MetricsConfigPermuterTest(absltest.TestCase):