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@hbctraining

Teaching materials at the Harvard Chan Bioinformatics Core

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  1. Intro-to-R-flipped Intro-to-R-flipped Public

    R 78 42

  2. Shell-for-bioinformatics Shell-for-bioinformatics Public

    HTML 40 24

  3. scRNA-seq_online scRNA-seq_online Public

    R 560 190

  4. Intro-to-rnaseq-hpc-salmon-flipped Intro-to-rnaseq-hpc-salmon-flipped Public

    Introduction to bulk RNA-seq

    HTML 102 43

  5. Intro-to-DGE Intro-to-DGE Public

    HTML 188 82

  6. Investigating-chromatin-biology-ChIPseq Investigating-chromatin-biology-ChIPseq Public

    HTML 85 37

Repositories

Showing 10 of 55 repositories
  • Intro-to-R-flipped Public
    hbctraining/Intro-to-R-flipped’s past year of commit activity
    R 78 42 2 0 Updated Feb 12, 2025
  • Intro-to-R-mkdocs Public
    hbctraining/Intro-to-R-mkdocs’s past year of commit activity
    Python 0 1 2 0 Updated Feb 12, 2025
  • main Public template
    hbctraining/main’s past year of commit activity
    SCSS 52 17 0 1 Updated Feb 12, 2025
  • Intro-to-rnaseq-hpc-salmon-flipped Public

    Introduction to bulk RNA-seq

    hbctraining/Intro-to-rnaseq-hpc-salmon-flipped’s past year of commit activity
    HTML 102 43 6 1 Updated Feb 11, 2025
  • Training-modules Public

    Materials for short, half-day workshops

    hbctraining/Training-modules’s past year of commit activity
    Jupyter Notebook 321 150 18 2 Updated Feb 5, 2025
  • Intro-to-shell-fasrc-flipped Public archive

    Shell training materials for the FAS-RC cluster

    hbctraining/Intro-to-shell-fasrc-flipped’s past year of commit activity
    Shell 5 4 1 0 Updated Feb 4, 2025
  • Intro-to-peak-analysis Public

    An introduction to various methods/approaches for the analysis of peaks generated from ChIP-seq / CUT&RUN / ATAC-seq

    hbctraining/Intro-to-peak-analysis’s past year of commit activity
    Shell 22 CC0-1.0 4 8 0 Updated Feb 4, 2025
  • Shell-for-bioinformatics Public
    hbctraining/Shell-for-bioinformatics’s past year of commit activity
    HTML 40 24 6 0 Updated Feb 4, 2025
  • Investigating-chromatin-biology-ChIPseq Public
    hbctraining/Investigating-chromatin-biology-ChIPseq’s past year of commit activity
    HTML 85 CC0-1.0 37 8 0 Updated Feb 4, 2025
  • Pseudobulk-for-scRNAseq Public

    Approaches for looking at differential expression and differential abundance in scRNA-seq

    hbctraining/Pseudobulk-for-scRNAseq’s past year of commit activity
    R 0 CC0-1.0 1 8 0 Updated Feb 4, 2025
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