Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

View reads as pairs #31

Merged
merged 4 commits into from
Nov 30, 2024
Merged

View reads as pairs #31

merged 4 commits into from
Nov 30, 2024

Conversation

pkerpedjiev
Copy link
Member

@pkerpedjiev pkerpedjiev commented Nov 23, 2024

View reads as pairs. This will render mate pairs next to each other and draw a short line connecting them:

image
  • The option is enabled with the viewAsPairs viewconfig value.

  • Unfortunately this change got mixed up with some formatting changes. The bulk of the change was in switching from rendering "segments" (single reads) as atomic units to rendering "sections" (groups of mates) as atomic units. Sections are placed in a row and the ends of the segments comprising them are connected.

  • Update the version number in unpkg link in README.md if building a new release

@pkerpedjiev pkerpedjiev merged commit 47946d1 into master Nov 30, 2024
1 check passed
@pkerpedjiev pkerpedjiev deleted the kerpedji/paired-ends branch November 30, 2024 05:52
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

1 participant