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anna-parker committed Feb 27, 2025
1 parent 51dc7cd commit bb6a13e
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions ingest/Snakefile
Original file line number Diff line number Diff line change
Expand Up @@ -93,8 +93,8 @@ rule fetch_ncbi_dataset_package:
taxon_id=TAXON_ID,
api_key=NCBI_API_KEY,
gateway=f"--gateway-url {NCBI_GATEWAY_URL}" if NCBI_GATEWAY_URL else "",
use_mirror=bool(MIRROR_BUCKET),
mirror_url=f"{MIRROR_BUCKET.strip('/')}/{TAXON_ID}.zip"
use_mirror=bool(MIRROR_BUCKET),
mirror_url=f"{MIRROR_BUCKET.strip('/')}/{TAXON_ID}.zip",
shell:
"""
if [[ "{params.use_mirror}" == "True" ]]; then
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