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Achievements

Achievement: YOLOAchievement: Pull SharkAchievement: Quickdraw

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maggiebr0wn/README.md

So glad you're here!

The Nitty Gritty

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  • 🐝 Bioinformatics PhD candidate at GA Tech
  • 🍑 TX native in ATL
  • 🐶 🐢 My pets keep WFH from being lonely
  • 🔬 Expert in eQTL fine mapping, scRNA-seq & scATAC-seq analyses, immunology, building gene regulatory models
  • 💻 Currently diving into machine learning for biological and genetic applications

What I've been up to 😜

Tools for the single cell Multiomers 🧬

Nosy about my Github usage?

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  1. ArchR-to-Seurat ArchR-to-Seurat Public

    A tool which converts an ArchR project to Seurat object.

    R

  2. eQTL-AbO-Conditional-Analysis eQTL-AbO-Conditional-Analysis Public

    This project fine-maps eQTL with All but One conditional analysis. This work is published here: https://doi.org/10.1093/genetics/iyac162

    R 1

  3. scMultiome-Crohns-Disease scMultiome-Crohns-Disease Public

    This project characterizes the multiomic landscape of PBMC in Crohn's disease using scATAC-seq and scRNA-seq data.

    R 4 1

  4. scMultiome-TFBS-Analysis scMultiome-TFBS-Analysis Public

    The objective of this pipeline is to identify putative TF regulatory mechanisms focused on differentially accessible genes and differentially accessible chromatin obtained from single cell multiome…

    Shell 1

  5. scRNAseq-Analysis-Nasal-Polyps-ASCs scRNAseq-Analysis-Nasal-Polyps-ASCs Public

    Code for scRNA-seq analysis of antibody secreting cells from patients with chronic rhinosinusitis nasal polyposis. This work is published here: https://doi.org/10.1016/j.mucimm.2023.02.008

    R