Updating docs to match the code. #775
zrm22Annotations
2 errors and 1 warning
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RopeBwtIndexTest.testCliktParams():
src/test/kotlin/net/maizegenetics/phgv2/pathing/ropebwt/RopeBwtIndexTest.kt#L69
org.opentest4j.AssertionFailedError: expected: <Usage: ropebwt-index [<options>]
Error: must provide one of --pangenome-file, --hvcf-dir
> but was: <Usage: rope-bwt-index [<options>]
Error: no such option --num-threads. Did you mean --threads?
>
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PHGv2 CI
Process completed with exit code 1.
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PHGv2 CI
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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