ci: attempt to simplify test configs #555
Workflow file for this run
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| name: GitHub CI | |
| on: [push, pull_request] | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.event.pull_request.number || github.ref || github.run_id }} | |
| cancel-in-progress: true | |
| jobs: | |
| build: | |
| name: On ${{ matrix.os }} with (${{ matrix.compiler }}, python-${{ matrix.python-version }}, numpy-${{ matrix.numpy-version }}) | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| include: | |
| - os: ubuntu-24.04 | |
| compiler: gcc | |
| python-version: 3.9 | |
| numpy-version: 1 | |
| - os: ubuntu-24.04 | |
| compiler: gcc | |
| python-version: 3.13 | |
| numpy-version: 2 | |
| - os: macos-14 | |
| compiler: clang | |
| python-version: 3.9 | |
| numpy-version: 1 | |
| - os: macos-14 | |
| compiler: clang | |
| python-version: 3.13 | |
| numpy-version: 2 | |
| env: | |
| CC: ${{ matrix.compiler }} | |
| CORRFUNC_CI: true | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| - name: Setup Miniconda | |
| uses: conda-incubator/setup-miniconda@v3 | |
| with: | |
| auto-update-conda: true | |
| miniforge-version: latest | |
| conda-remove-defaults: true | |
| auto-activate-base: false | |
| activate-environment: "" | |
| - name: Install dependencies | |
| shell: bash -l {0} | |
| run: | | |
| conda create -n test python=${{ matrix.python-version }} numpy=${{ matrix.numpy-version }} nomkl gsl | |
| conda activate test | |
| - name: Display PATH, compiler, python | |
| shell: bash -l {0} | |
| run: | | |
| conda activate test | |
| echo "PATH = " $PATH | |
| echo "COMPILER = " `which ${{ matrix.compiler }}` | |
| echo "COMPILER VERSION = " `${{ matrix.compiler }} --version` | |
| echo "PYTHON = " `which python` | |
| echo "(PYTHON, NUMPY) version = " `python -c "import sys; import numpy as np; print(sys.version); print(np.__version__);"` | |
| echo "Preprocessor defs:" | |
| echo `${{ matrix.compiler }} -dM -E - -march=native` | |
| - name: lscpu on Linux | |
| if: matrix.os != 'macos-14' | |
| run: | | |
| lscpu | |
| - name: sysctl machdep.cpu on OSX | |
| if: matrix.os == 'macos-14' | |
| run: | | |
| sysctl machdep.cpu | |
| - name: compile | |
| shell: bash -l {0} | |
| run: | | |
| conda activate test | |
| make -r CC=${{ matrix.compiler }} | |
| - name: install | |
| shell: bash -l {0} | |
| run: | | |
| conda activate test | |
| make install CC=${{ matrix.compiler }} | |
| - name: compile and install python extensions | |
| shell: bash -l {0} | |
| run: | | |
| conda activate test | |
| echo "CC = " $CC | |
| export CC=${{ matrix.compiler }} | |
| python -m pip install -e . | |
| - name: tests | |
| shell: bash -l {0} | |
| run: | | |
| conda activate test | |
| make tests CC=${{ matrix.compiler }} | |
| - name: doctests | |
| shell: bash -l {0} | |
| if: matrix.os == 'ubuntu-24.04' && matrix.python-version == '3.13' && matrix.numpy-version == '2' | |
| run: | | |
| conda activate test | |
| python -m pip install 'sphinx>=1.8' | |
| make -C docs doctest | |
| - name: Python tests | |
| shell: bash -l {0} | |
| run: | | |
| conda activate test | |
| if [ "${{ matrix.os }}" = "macos-14" ]; then | |
| # We currently don't build with OpenMP on MacOS in CI | |
| export CORRFUNC_PYTEST_MAX_THREADS=1 | |
| fi | |
| python -m pip install pytest | |
| python -m pytest -v |