New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

update rqcfilter.wdl to be compatible with new shared workflow requirements #24

Open

aclum opened this issue Sep 14, 2023 · 1 comment

Contributor

aclum commented Sep 14, 2023

see https://docs.google.com/document/d/1gqpopBC1ovWR7p5WFilI-Kn_BYOSVBkX4fyDg-8nlX0/edit for requirements.
At a minimum we need to remove the runtime_minutes to be able to run with JAWS, note this is also filed as a bug w/JAWS since this should be ignored.

https://code.jgi.doe.gov/advanced-analysis/jaws-support/-/issues/118

Contributor Author

aclum commented Sep 15, 2023

Note runtime_minutes is a valid backend parameter for slurm
https://cromwell.readthedocs.io/en/stable/backends/SLURM/

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment