Skip to content
@microbiomedata

National Microbiome Data Collaborative

National Microbiome Data Collaborative

Pinned Loading

  1. nmdc-schema nmdc-schema Public

    National Microbiome Data Collaborative (NMDC) unified data model

    Python 29 8

  2. NMDC_documentation NMDC_documentation Public

    Document workflows, schemas, and portal

    2 3

Repositories

Showing 10 of 83 repositories
  • nmdc-field-notes Public

    Mobile app for metadata collection on the go

    microbiomedata/nmdc-field-notes’s past year of commit activity
    TypeScript 2 0 29 1 Updated Feb 19, 2025
  • nmdc_notebooks Public

    Jupyter Notebooks demonstrating R and Python-based access to NMDC metadata and data

    microbiomedata/nmdc_notebooks’s past year of commit activity
    Jupyter Notebook 5 CC0-1.0 0 13 5 Updated Feb 19, 2025
  • nmdc-runtime Public

    Runtime system for NMDC data management and orchestration

    microbiomedata/nmdc-runtime’s past year of commit activity
    HTML 7 5 107 (2 issues need help) 17 Updated Feb 18, 2025
  • ontology-loader Public
    microbiomedata/ontology-loader’s past year of commit activity
    Python 0 0 0 0 Updated Feb 18, 2025
  • nmdc_mass_spectrometry_metadata_generation Public

    Mass spectrometry metadata generation

    microbiomedata/nmdc_mass_spectrometry_metadata_generation’s past year of commit activity
    Python 0 0 6 1 Updated Feb 18, 2025
  • external-metadata-awareness Public

    Tools for fetching and processing external schemas, ontologies and metadata records. Includes value set maintenance and some GitHub org exploration.

    microbiomedata/external-metadata-awareness’s past year of commit activity
    Jupyter Notebook 0 0 20 1 Updated Feb 18, 2025
  • nmdc_automation Public

    Prototype automation

    microbiomedata/nmdc_automation’s past year of commit activity
    Python 2 2 47 4 Updated Feb 18, 2025
  • ReadsQC Public
    microbiomedata/ReadsQC’s past year of commit activity
    WDL 3 6 2 2 Updated Feb 18, 2025
  • nmdc-server Public

    Data portal client and server for NMDC.

    microbiomedata/nmdc-server’s past year of commit activity
    Python 9 0 147 13 Updated Feb 15, 2025
  • nmdc-schema Public

    National Microbiome Data Collaborative (NMDC) unified data model

    microbiomedata/nmdc-schema’s past year of commit activity
    Python 29 CC0-1.0 8 361 (1 issue needs help) 6 Updated Feb 14, 2025
View all repositories

Top languages

Loading…

Most used topics

Loading…